Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00198 and BPUM_0084
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence dna-align/BSNT_00198___rpmG.1.24716.seq
# -bsequence dna-align/BPUM_0084___rpmG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00198___rpmG-BPUM_0084___rpmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00198___rpmG-BPUM_0084___rpmG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00198___rpmG
# 2: BPUM_0084___rpmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity: 121/151 (80.1%)
# Similarity: 121/151 (80.1%)
# Gaps: 2/151 ( 1.3%)
# Score: 473.0
#
#
#=======================================
BSNT_00198___ 1 ATGAGAAAAAAGATTACGTTAGCATG-CAAGACATGCGGAAACCGTAATT 49
|||||.|||||||||||..||||.|| .||||| |||||||.|||.||||
BPUM_0084___r 1 ATGAGGAAAAAGATTACTCTAGCCTGTAAAGAC-TGCGGAAGCCGCAATT 49
BSNT_00198___ 50 ATACGACAATGAAGAGCTCTGCATCAGCGGCTGAGCGATTAGAAGTAAAG 99
|||||||||||||.||...|||.|||||.|||||..||||||||||.|||
BPUM_0084___r 50 ATACGACAATGAAAAGTGATGCTTCAGCAGCTGAAAGATTAGAAGTTAAG 99
BSNT_00198___ 100 AAATACTGCAGTACTTGCAATTCACATACAGCTCATCTTGAAACAAAATA 149
|||||.||||..|||||.||||||||||.|.|.|||.|.|||||.||.||
BPUM_0084___r 100 AAATATTGCAAGACTTGTAATTCACATAAAACACATTTAGAAACGAAGTA 149
BSNT_00198___ 150 G 150
.
BPUM_0084___r 150 A 150
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