Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00196 and BPUM_0082
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence dna-align/BSNT_00196___yacP.1.24716.seq
# -bsequence dna-align/BPUM_0082___yacP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00196___yacP-BPUM_0082___yacP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00196___yacP-BPUM_0082___yacP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00196___yacP
# 2: BPUM_0082___yacP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 523
# Identity: 389/523 (74.4%)
# Similarity: 389/523 (74.4%)
# Gaps: 20/523 ( 3.8%)
# Score: 1403.0
#
#
#=======================================
BSNT_00196___ 1 ATGGATATCCTGTTAGTAGACGGGTACAACATGATTGGAGCCTGGCCGCA 50
|||||.|||||.|||||.||.||.|||||||||||.||.||.|||||...
BPUM_0082___y 1 ATGGACATCCTCTTAGTCGATGGATACAACATGATAGGTGCATGGCCAAG 50
BSNT_00196___ 51 GCTGAAGGATTTAAAAGCGAACAGTTTTGAAGAGGCGAGAGACGTACTGA 100
||||.||.|.|||||.|..|||||.||||||||.||.||||||.||||||
BPUM_0082___y 51 GCTGCAGCACTTAAAGGAAAACAGCTTTGAAGAAGCCAGAGACATACTGA 100
BSNT_00196___ 101 TTCAGAAAATGGCGGAATATCAATCGTATACAGGAAACAGGGTTATTGTT 150
||||.||..|.||.|||||||||.|.||||||||..|..|.||.||||||
BPUM_0082___y 101 TTCAAAATTTAGCAGAATATCAAGCCTATACAGGGTATCGAGTCATTGTT 150
BSNT_00196___ 151 GTTTTTGACGCGCATCTCGTAAAAGGGCTTGAGAAAAAACAGACCAACCA 200
||.||.||.||.|||.|.||.|||||..|.||.|||||.|..|.|||.||
BPUM_0082___y 151 GTATTCGATGCCCATATGGTCAAAGGAATCGAAAAAAAGCGAATCAATCA 200
BSNT_00196___ 201 TAGAGTTGAAGTAATTTTTACAAAAGAAAATGAGACGGCTGATGAGCGGA 250
..||||.||.||.||.|||||.|.|||.|||||.||||||||||||||||
BPUM_0082___y 201 CCGAGTAGAGGTCATCTTTACGAGAGAGAATGAAACGGCTGATGAGCGGA 250
BSNT_00196___ 251 TAGAAAAGCTCGCTCAGGCTTTGAATAATATTGCGACTCAAATTCACGTT 300
|.||||||||.||.||||.|||||||||||||..|||.||.|||||.||.
BPUM_0082___y 251 TTGAAAAGCTTGCCCAGGATTTGAATAATATTCGGACGCAGATTCATGTG 300
BSNT_00196___ 301 GCGACCTCTGACTATACTGAGCAGTGGGCGATTTTCGGACAGGGGGCATT 350
||||||||.||||.|||.||.||.|||||.||.||.|||||.||.||..|
BPUM_0082___y 301 GCGACCTCAGACTTTACAGAACAATGGGCAATCTTTGGACAAGGAGCTCT 350
BSNT_00196___ 351 GCGGAAATCGGCCCGGGAGCTTTTGAGAGAGGTAGAAACGATTGAAAGGC 400
.|||||.|||||.||.||||||||.||||||.|.|||..|||.||| |
BPUM_0082___y 351 TCGGAAGTCGGCTCGAGAGCTTTTAAGAGAGATTGAAGTGATCGAA---C 397
BSNT_00196___ 401 GAATAGA--GAGAC--GGGTAAGAAAAATCACTTCCGAAAAGCCGGC--- 443
||| ||| ||.|| |.||.|.|||.||.|||||.||.||.||.||
BPUM_0082___y 398 GAA-AGATTGAAACGAGAGTCAAAAAGATTACTTCTGATAAACCAGCATC 446
BSNT_00196___ 444 --GGGTAAAATTGCTTTATCGGAAGAGGTTTTGAAAACGTTTGAAAAGTG 491
.|.||.||||| ||.|||||.||.|||||||||||||||||.||
BPUM_0082___y 447 CAAGATAGAATTG-----TCAGAAGATGTATTGAAAACGTTTGAAAAATG 491
BSNT_00196___ 492 GAGGCG-GGGAGACTTAGATTAA 513
|.|||| |||| |..||||.||.
BPUM_0082___y 492 GCGGCGTGGGA-ATCTAGAATAG 513
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