Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00195 and BPUM_0081

See Amino acid alignment / Visit BSNT_00195 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence dna-align/BSNT_00195___yacO.1.24716.seq
#    -bsequence dna-align/BPUM_0081___yacO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00195___yacO-BPUM_0081___yacO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00195___yacO-BPUM_0081___yacO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00195___yacO
# 2: BPUM_0081___yacO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     585/753 (77.7%)
# Similarity:   585/753 (77.7%)
# Gaps:           6/753 ( 0.8%)
# Score: 2217.0
# 
#
#=======================================

BSNT_00195___      1 ATGAGTCAGCAACATGATTACGTCATAGGGAAAAATGCAGTGATCGAGAC     50
                     ||||||||||||||||||||.||.||.|||||||||||||||||.||.||
BPUM_0081___y      1 ATGAGTCAGCAACATGATTATGTGATTGGGAAAAATGCAGTGATTGAAAC     50

BSNT_00195___     51 GTTAAAATCTGATCGGAAGCTGTATAAGCTGTGGATGGCGGAAAACACCG    100
                     ..||||.||.|||||..||.|.||.|||||.||||||||.||||||||.|
BPUM_0081___y     51 ACTAAAGTCAGATCGAGAGTTATACAAGCTCTGGATGGCAGAAAACACTG    100

BSNT_00195___    101 TAAAGGGACAAGCACAGCAAGTGATTGAGCTTGCCAAAAAGCAGGGAATC    150
                     ||||.||||||||.|||||.||.|||||.||.||.|||||.||....||.
BPUM_0081___y    101 TAAAAGGACAAGCCCAGCAGGTCATTGAACTCGCAAAAAAACAAAATATT    150

BSNT_00195___    151 ACGATTCAATACGTCCCGAGAAAAAAACTCGATCAAATGGTGACAGGACA    200
                     ||.|||||.||.||.|||||.|||||.||.|||||||||||.|||||.||
BPUM_0081___y    151 ACCATTCAGTATGTTCCGAGGAAAAAGCTTGATCAAATGGTCACAGGTCA    200

BSNT_00195___    201 GCATCAGGGCGTAGTGGCACAGGTTGCAGCGTATGAATATGCAGAACTGG    250
                     |||.|||||..|.||.|||||.||.|||||.|||||||||||||||.|||
BPUM_0081___y    201 GCACCAGGGAATCGTTGCACAAGTAGCAGCATATGAATATGCAGAATTGG    250

BSNT_00195___    251 ACGATTTATAT-AAAGCAGCCGAAGAAAAAAATGAACAGCCTTTCTTCCT    299
                     |||||.||||| |||.| ||.|||.|...||||||||||||.||.||.||
BPUM_0081___y    251 ACGATCTATATCAAATC-GCTGAACAGCGAAATGAACAGCCATTTTTTCT    299

BSNT_00195___    300 CATTCTGGACGAGCTTGAAGACCCTCATAACCTTGGTTCCATTATGAGGA    349
                     .||..|.||.||..||||||||||.|||||..|.||||||||||||.|.|
BPUM_0081___y    300 TATCTTAGATGAAATTGAAGACCCGCATAATTTAGGTTCCATTATGCGTA    349

BSNT_00195___    350 CAGCAGATGCGGTCGGCGCTCATGGCATCGTCATTCCAAAACGGAGAGCT    399
                     ||||||||||.||.||.||.||.||.||.||||||||.|||.|||||||.
BPUM_0081___y    350 CAGCAGATGCTGTAGGTGCACACGGGATTGTCATTCCGAAAAGGAGAGCG    399

BSNT_00195___    400 GTCGGGCTGACAACAACAGTGGCAAAAGCTTCAACAGGAGCAATTGAGCA    449
                     |||||..|.||.|||||.||.||.||.||.||.||.|||||||||||.||
BPUM_0081___y    400 GTCGGCTTAACGACAACTGTTGCCAAGGCATCTACTGGAGCAATTGAACA    449

BSNT_00195___    450 CATTCCTGTAGCAAGAGTCACCAATTTGGCACGGACGTTAGAAGAGATGA    499
                     .||||||||.||.|.||||||||||.|..||.|..|..|.||.|||||||
BPUM_0081___y    450 TATTCCTGTTGCCAAAGTCACCAATCTTTCAAGAGCTCTTGATGAGATGA    499

BSNT_00195___    500 AAGAGCGGGGAATCTGGGTTGTCGGAACGGATGCGTCCGCGCGTGAGGAT    549
                     ||||..|.|||||||||||.|..|||||.||||||||.||.....|||||
BPUM_0081___y    500 AAGAAAGAGGAATCTGGGTCGCGGGAACAGATGCGTCTGCCAAACAGGAT    549

BSNT_00195___    550 TACCG-TAATATGGACGGCAATATGCCTTTGGCTCTAGTCATCGGAAGTG    598
                     |||.| .||| |.||.||||..|||||..|.|||||.||.||.||.||||
BPUM_0081___y    550 TACAGACAAT-TTGATGGCACGATGCCGCTTGCTCTCGTGATTGGCAGTG    598

BSNT_00195___    599 AAGGAAAAGGGATGGGCCGCCTTG-TGAAGGAAAAGTGCGATTTTCTCAT    647
                     |||||||||||||.||||| .||| |.||.||||||||.||||||||.||
BPUM_0081___y    599 AAGGAAAAGGGATTGGCCG-ATTGATCAAAGAAAAGTGTGATTTTCTAAT    647

BSNT_00195___    648 TAAACTCCCGATGGCCGGAAAGGTAACTTCACTAAATGCATCTGTCGCGG    697
                     |||.||.||.||||||||||||||.|||||..||||.||.||.||.||.|
BPUM_0081___y    648 TAAGCTGCCAATGGCCGGAAAGGTCACTTCGTTAAACGCGTCAGTTGCTG    697

BSNT_00195___    698 CTGGTCTTTTGATGTATGAAGTCTACCGGAAACGAAACCCTGTGGGAGAA    747
                     ||.||||.||||||||||||||.||.||.|||||..|.||..|.||||||
BPUM_0081___y    698 CTAGTCTATTGATGTATGAAGTGTATCGAAAACGTTATCCGTTAGGAGAA    747

BSNT_00195___    748 TAA    750
                     ||.
BPUM_0081___y    748 TAG    750


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