Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00195 and BPUM_0081
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence dna-align/BSNT_00195___yacO.1.24716.seq
# -bsequence dna-align/BPUM_0081___yacO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00195___yacO-BPUM_0081___yacO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00195___yacO-BPUM_0081___yacO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00195___yacO
# 2: BPUM_0081___yacO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity: 585/753 (77.7%)
# Similarity: 585/753 (77.7%)
# Gaps: 6/753 ( 0.8%)
# Score: 2217.0
#
#
#=======================================
BSNT_00195___ 1 ATGAGTCAGCAACATGATTACGTCATAGGGAAAAATGCAGTGATCGAGAC 50
||||||||||||||||||||.||.||.|||||||||||||||||.||.||
BPUM_0081___y 1 ATGAGTCAGCAACATGATTATGTGATTGGGAAAAATGCAGTGATTGAAAC 50
BSNT_00195___ 51 GTTAAAATCTGATCGGAAGCTGTATAAGCTGTGGATGGCGGAAAACACCG 100
..||||.||.|||||..||.|.||.|||||.||||||||.||||||||.|
BPUM_0081___y 51 ACTAAAGTCAGATCGAGAGTTATACAAGCTCTGGATGGCAGAAAACACTG 100
BSNT_00195___ 101 TAAAGGGACAAGCACAGCAAGTGATTGAGCTTGCCAAAAAGCAGGGAATC 150
||||.||||||||.|||||.||.|||||.||.||.|||||.||....||.
BPUM_0081___y 101 TAAAAGGACAAGCCCAGCAGGTCATTGAACTCGCAAAAAAACAAAATATT 150
BSNT_00195___ 151 ACGATTCAATACGTCCCGAGAAAAAAACTCGATCAAATGGTGACAGGACA 200
||.|||||.||.||.|||||.|||||.||.|||||||||||.|||||.||
BPUM_0081___y 151 ACCATTCAGTATGTTCCGAGGAAAAAGCTTGATCAAATGGTCACAGGTCA 200
BSNT_00195___ 201 GCATCAGGGCGTAGTGGCACAGGTTGCAGCGTATGAATATGCAGAACTGG 250
|||.|||||..|.||.|||||.||.|||||.|||||||||||||||.|||
BPUM_0081___y 201 GCACCAGGGAATCGTTGCACAAGTAGCAGCATATGAATATGCAGAATTGG 250
BSNT_00195___ 251 ACGATTTATAT-AAAGCAGCCGAAGAAAAAAATGAACAGCCTTTCTTCCT 299
|||||.||||| |||.| ||.|||.|...||||||||||||.||.||.||
BPUM_0081___y 251 ACGATCTATATCAAATC-GCTGAACAGCGAAATGAACAGCCATTTTTTCT 299
BSNT_00195___ 300 CATTCTGGACGAGCTTGAAGACCCTCATAACCTTGGTTCCATTATGAGGA 349
.||..|.||.||..||||||||||.|||||..|.||||||||||||.|.|
BPUM_0081___y 300 TATCTTAGATGAAATTGAAGACCCGCATAATTTAGGTTCCATTATGCGTA 349
BSNT_00195___ 350 CAGCAGATGCGGTCGGCGCTCATGGCATCGTCATTCCAAAACGGAGAGCT 399
||||||||||.||.||.||.||.||.||.||||||||.|||.|||||||.
BPUM_0081___y 350 CAGCAGATGCTGTAGGTGCACACGGGATTGTCATTCCGAAAAGGAGAGCG 399
BSNT_00195___ 400 GTCGGGCTGACAACAACAGTGGCAAAAGCTTCAACAGGAGCAATTGAGCA 449
|||||..|.||.|||||.||.||.||.||.||.||.|||||||||||.||
BPUM_0081___y 400 GTCGGCTTAACGACAACTGTTGCCAAGGCATCTACTGGAGCAATTGAACA 449
BSNT_00195___ 450 CATTCCTGTAGCAAGAGTCACCAATTTGGCACGGACGTTAGAAGAGATGA 499
.||||||||.||.|.||||||||||.|..||.|..|..|.||.|||||||
BPUM_0081___y 450 TATTCCTGTTGCCAAAGTCACCAATCTTTCAAGAGCTCTTGATGAGATGA 499
BSNT_00195___ 500 AAGAGCGGGGAATCTGGGTTGTCGGAACGGATGCGTCCGCGCGTGAGGAT 549
||||..|.|||||||||||.|..|||||.||||||||.||.....|||||
BPUM_0081___y 500 AAGAAAGAGGAATCTGGGTCGCGGGAACAGATGCGTCTGCCAAACAGGAT 549
BSNT_00195___ 550 TACCG-TAATATGGACGGCAATATGCCTTTGGCTCTAGTCATCGGAAGTG 598
|||.| .||| |.||.||||..|||||..|.|||||.||.||.||.||||
BPUM_0081___y 550 TACAGACAAT-TTGATGGCACGATGCCGCTTGCTCTCGTGATTGGCAGTG 598
BSNT_00195___ 599 AAGGAAAAGGGATGGGCCGCCTTG-TGAAGGAAAAGTGCGATTTTCTCAT 647
|||||||||||||.||||| .||| |.||.||||||||.||||||||.||
BPUM_0081___y 599 AAGGAAAAGGGATTGGCCG-ATTGATCAAAGAAAAGTGTGATTTTCTAAT 647
BSNT_00195___ 648 TAAACTCCCGATGGCCGGAAAGGTAACTTCACTAAATGCATCTGTCGCGG 697
|||.||.||.||||||||||||||.|||||..||||.||.||.||.||.|
BPUM_0081___y 648 TAAGCTGCCAATGGCCGGAAAGGTCACTTCGTTAAACGCGTCAGTTGCTG 697
BSNT_00195___ 698 CTGGTCTTTTGATGTATGAAGTCTACCGGAAACGAAACCCTGTGGGAGAA 747
||.||||.||||||||||||||.||.||.|||||..|.||..|.||||||
BPUM_0081___y 698 CTAGTCTATTGATGTATGAAGTGTATCGAAAACGTTATCCGTTAGGAGAA 747
BSNT_00195___ 748 TAA 750
||.
BPUM_0081___y 748 TAG 750
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