Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00194 and BPUM_0080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence dna-align/BSNT_00194___yazC.1.24716.seq
# -bsequence dna-align/BPUM_0080___yazC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00194___yazC-BPUM_0080___yazC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00194___yazC-BPUM_0080___yazC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00194___yazC
# 2: BPUM_0080___yazC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 334/443 (75.4%)
# Similarity: 334/443 (75.4%)
# Gaps: 22/443 ( 5.0%)
# Score: 1206.5
#
#
#=======================================
BSNT_00194___ 1 ATGCTTGAA-TTTGATACGATAAAAGATTCTAAGCAGCTTAACGGTCTTG 49
||| ||||| |||||.|.|.|.|||||...|||.||..|.|||||.||||
BPUM_0080___y 1 ATG-TTGAATTTTGAAAAGCTGAAAGACGGTAAACAATTGAACGGACTTG 49
BSNT_00194___ 50 CGCTTGCTTATATAGGTGATGCCATTTTTGAAGTGTATGTCAGGCATCAC 99
|||||||||||||.||||||||||||||||||||.||.||.|||||||||
BPUM_0080___y 50 CGCTTGCTTATATGGGTGATGCCATTTTTGAAGTCTACGTGAGGCATCAC 99
BSNT_00194___ 100 CTGCT--TAAGCAGGGCTTTACCAAACCAAATGATCTTCATAAGAAATCA 147
||.|| .||...|||| .||.|||||||||||.||.||.||...|.||
BPUM_0080___y 100 CTCCTCCAAACGGGGGC--GACAAAACCAAATGAGCTGCACAAACGAGCA 147
BSNT_00194___ 148 AGCCGGATTGTTTCAGCAAAGTCACAGGCTGAGATCCTATTTTTT----- 192
|||...||.||||||||.||.||.|||||.| |||||||.|
BPUM_0080___y 148 AGCAAAATCGTTTCAGCTAAATCTCAGGCAG-----CTATTTTATTTACG 192
BSNT_00194___ 193 CTGCAGAATCAATCATTTTTTACGGAAGAAGAGGAAGCGGTGCTGAAAAG 242
||.|||.|.|||...|||||.||.||||.|||.|||||||||||||||||
BPUM_0080___y 193 CTTCAGCAGCAAGGCTTTTTCACTGAAGCAGAAGAAGCGGTGCTGAAAAG 242
BSNT_00194___ 243 AGGCAGAAATGCCAAGTCAGGGACAACACCTAAAAATACAGATGTTCAGA 292
|||.||||||||.||.|||||.|||...||||||||.|||||.|||||.|
BPUM_0080___y 243 AGGAAGAAATGCAAAATCAGGCACAGTGCCTAAAAACACAGACGTTCAAA 292
BSNT_00194___ 293 CGTACCGCTACAGTACAGCATTTGAAGCGCTTCTGGGCTACCTTTTTCTA 342
||||.||.||.|||||.||.|||||||||||..||||.||..|.|||.|.
BPUM_0080___y 293 CGTATCGTTATAGTACGGCGTTTGAAGCGCTCATGGGTTATTTATTTATT 342
BSNT_00194___ 343 GAGAAAAAAGAGGAACGACTTAG-TCAGCTCG--TAGCCGAAGCTATACA 389
||.||..|.||.||||| ||||| ..|||| | |||.| |.||.||..|
BPUM_0080___y 343 GATAAGCAGGACGAACG-CTTAGAAGAGCT-GATTAGTC-AGGCGATTGA 389
BSNT_00194___ 390 ATTCGGGACGTCAGGGAGGAAAACAAATGAGTCAGCAACATGA 432
|.||||.||||||||||||||.|||||||||||||||||||||
BPUM_0080___y 390 AATCGGAACGTCAGGGAGGAAGACAAATGAGTCAGCAACATGA 432
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