Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00186 and BPUM_0076

See Amino acid alignment / Visit BSNT_00186 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:06
# Commandline: needle
#    -asequence dna-align/BSNT_00186___ispF.1.24716.seq
#    -bsequence dna-align/BPUM_0076___ispF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00186___ispF-BPUM_0076___ispF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00186___ispF-BPUM_0076___ispF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00186___ispF
# 2: BPUM_0076___ispF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity:     367/483 (76.0%)
# Similarity:   367/483 (76.0%)
# Gaps:          12/483 ( 2.5%)
# Score: 1337.0
# 
#
#=======================================

BSNT_00186___      1 ATGTTTAGAATTGGACAAGGATTTGATGTGCATCAATTAGTGGAGGGCCG     50
                     |||||.|||||.||||||||.||||||||.|||||||||...|||||..|
BPUM_0076___i      1 ATGTTGAGAATAGGACAAGGCTTTGATGTACATCAATTAACAGAGGGAAG     50

BSNT_00186___     51 TCCTCTCATTATTGGCGGAATTGAAATCCCGTACGAAAAAGGGCTGCTTG    100
                     .|||.|.|||||.|||||..|....|||||.||.|||||.||||||||||
BPUM_0076___i     51 ACCTTTGATTATCGGCGGGGTCACCATCCCATATGAAAAGGGGCTGCTTG    100

BSNT_00186___    101 GCCATTCTGATGCAGACGTATTGCTGCATACTGTCGCTGACGCCTGCCTG    150
                     |.|||||.||.||.||.|||.||||.||.||.||.||.||.||||||||.
BPUM_0076___i    101 GGCATTCAGACGCTGATGTACTGCTCCACACAGTGGCAGATGCCTGCCTA    150

BSNT_00186___    151 GGAGCTGTGGGTGAAGGAGACATCGGCAAGCATTTTCCTGACACAGATCC    200
                     ||.||..|.|.|||||||||.|||||||..|||||.||.||||||||.||
BPUM_0076___i    151 GGTGCGATTGCTGAAGGAGATATCGGCAGACATTTCCCGGACACAGACCC    200

BSNT_00186___    201 CGAGTTCAAGGACGCAGATTCTTTCAAATTACTTCAGCATGTCTGGGGAA    250
                     .|||||.|||||.||.||||||||..|||||||.||||||||.||||.|.
BPUM_0076___i    201 TGAGTTTAAGGATGCGGATTCTTTTCAATTACTGCAGCATGTGTGGGCAC    250

BSNT_00186___    251 TCGTGAAACAGAAGGGGTATGTCCTTGGGAACATTGATTGCACCATCATA    300
                     |.||.||..|.||.||.||....||||.|||.|||||||||||||||||.
BPUM_0076___i    251 TAGTAAAGGAAAAAGGCTACACACTTGTGAATATTGATTGCACCATCATG    300

BSNT_00186___    301 GCGCAAAAGCCGAAGAT-GCTGCCGTACATAGAA--GATATGAGAAAAAG    347
                     ||||||||||||||.|| ||| ||.||.||..||  |||.||.||.||  
BPUM_0076___i    301 GCGCAAAAGCCGAAAATGGCT-CCTTATATTCAACCGATGTGTGAGAA--    347

BSNT_00186___    348 AATTGCTGAAGGCCTTGAGGCAGATGTTTCTCAAGTAAATGTAAAAGCAA    397
                     .|||||.||||..||||||||||||||..|.||.||.|||||.|||||.|
BPUM_0076___i    348 GATTGCAGAAGCGCTTGAGGCAGATGTCACACAGGTGAATGTGAAAGCTA    397

BSNT_00186___    398 CAACGACAGAAAAGCTTGGATTTACAGGCCG-GGCGGAAGGAATAGCGGC    446
                     |.|||||.||.||.||.|||||||||||..| ||| ||||||||.||..|
BPUM_0076___i    398 CGACGACGGAGAAACTCGGATTTACAGGAAGAGGC-GAAGGAATTGCCTC    446

BSNT_00186___    447 TCAGGCGACAGTGCTGAT--ACAAAAAGGCTAA    477
                     ||||||.||.|||||..|  |.||||||  |||
BPUM_0076___i    447 TCAGGCAACGGTGCTTCTTCAGAAAAAG--TAA    477


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