Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00183 and BPUM_0074
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:06
# Commandline: needle
# -asequence dna-align/BSNT_00183___yacL.1.24716.seq
# -bsequence dna-align/BPUM_0074___yacL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00183___yacL-BPUM_0074___yacL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00183___yacL-BPUM_0074___yacL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00183___yacL
# 2: BPUM_0074___yacL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity: 880/1114 (79.0%)
# Similarity: 880/1114 (79.0%)
# Gaps: 26/1114 ( 2.3%)
# Score: 3479.0
#
#
#=======================================
BSNT_00183___ 1 ATGTTAAAACGAATAGTTCAGGCGTTCTTCATTATTTTTGGCGGCGTTGT 50
|||||||||.||||.|||||||||||.||.||.||||||||.|..|||||
BPUM_0074___y 1 ATGTTAAAAAGAATCGTTCAGGCGTTTTTTATCATTTTTGGTGCAGTTGT 50
BSNT_00183___ 51 TGGTATATTTTTGATACCTGAATTGTTTGTACTGTTAAATATACAGGACA 100
.||.||.|||.|.||.||.||.||.|||.|.|||||||||.||.||||||
BPUM_0074___y 51 AGGGATTTTTATCATTCCAGAGTTATTTCTGCTGTTAAATGTAAAGGACA 100
BSNT_00183___ 101 TACCTTTAATAACAAACGCATATACGTCTGCGGCAATAGGAGCAATTATC 150
|||||||.||.|||||.||.||..|.||.||...|||||||||...|.|.
BPUM_0074___y 101 TACCTTTCATTACAAATGCTTACTCTTCAGCACTAATAGGAGCCGCTGTG 150
BSNT_00183___ 151 TTTTTTCTCATCAGTATATGGGGTACAGAATACGTTGTGAACTGGGTGAA 200
||.||..|||||.|.|.||||.|.||||..||.||.||.||.||||||||
BPUM_0074___y 151 TTCTTAATCATCGGCAAATGGTGCACAGGTTATGTGGTTAATTGGGTGAA 200
BSNT_00183___ 201 GTGGATAGAGGATTCATTGTTAAAAGCGCCGGTTCCAGATTTGTTATT-- 248
.|||||.||||||||..|.|||||.|||||..||||.|| |.|||||
BPUM_0074___y 201 ATGGATCGAGGATTCTCTATTAAAGGCGCCTCTTCCTGA--TCTTATTTC 248
BSNT_00183___ 249 TGGAAGTCTTGGCTTAGTTTTTGGACTTATAATTGCTTATCTTATCGTAA 298
|||||||.|.||.|||||.|||||||||||..|.||.||||||||.||||
BPUM_0074___y 249 TGGAAGTTTCGGATTAGTATTTGGACTTATTCTAGCATATCTTATTGTAA 298
BSNT_00183___ 299 ATGTTATTCCTTTAGACAATATACCTTACCGCATATTCAGCACAATAATT 348
|.||.|||||..||.|||||||.||.||.|..||.||..|.||.||.|||
BPUM_0074___y 299 ACGTGATTCCGCTAAACAATATCCCATATCATATTTTTGGTACCATTATT 348
BSNT_00183___ 349 CCTGTATTTT--TGGCTTTCTTCCTCGGTTATCTCGGCTTCCAGGTGGGC 396
|| .||||| ||||||||||..|.||.||.||.||.||.|||||.||.
BPUM_0074___y 349 CC--GATTTTCCTGGCTTTCTTTTTAGGATACCTTGGATTTCAGGTAGGG 396
BSNT_00183___ 397 TTTAAGAAAAAGGATGAATTGATCAGCCTGTTTTCCATTTCCGCCAGA-A 445
||||||||.|||||||||.||||..|.|||||.|| || || .
BPUM_0074___y 397 TTTAAGAAGAAGGATGAAATGATGGGGCTGTTCTC----TC-----GATC 437
BSNT_00183___ 446 TGCAA--------AAGAAAAAAGGAACAGCTGATGAAGAACATGAGGTTC 487
||||| ||||||||||||.||||||||||.||||.|||..|..
BPUM_0074___y 438 TGCAAAGGTCACCAAGAAAAAAGGAGCAGCTGATGATGAACCTGAAATAG 487
BSNT_00183___ 488 AAGACAAGAAGCTGAAAATTTTGGACACTAGTGTTATTATTGATGGGAGA 537
||||.||.||||||||||||||.|||||.||||||||.||||||||.|||
BPUM_0074___y 488 AAGATAAAAAGCTGAAAATTTTAGACACAAGTGTTATCATTGATGGAAGA 537
BSNT_00183___ 538 ATAGCAGATATTTGTCAGACTGGTTTTTTAGAGGGAGTTATCGTGATTCC 587
||.||||||||||||||.|||||.||.|||||.||.||.||.||.|||||
BPUM_0074___y 538 ATCGCAGATATTTGTCAAACTGGATTCTTAGAAGGCGTCATGGTCATTCC 587
BSNT_00183___ 588 GCAGTTTGTCCTTGAGGAATTGCAGCATATTGCAGACTCTTCAGATGTTT 637
.||.|||||.||.||||||||.||||||||||||||||||||.|||||.|
BPUM_0074___y 588 TCAATTTGTGCTCGAGGAATTACAGCATATTGCAGACTCTTCTGATGTAT 637
BSNT_00183___ 638 TAAAACGAAACAGAGGACGCCGCGGTCTTGATATCCTGAACCGCATTCAG 687
||||..||||.|||||.||..|.|||||||||||..|.||.||.|||||.
BPUM_0074___y 638 TAAAGAGAAATAGAGGCCGAAGAGGTCTTGATATTTTAAATCGTATTCAA 687
BSNT_00183___ 688 AAAGAATTAGACATTGAAGTTGAAATTTACGAAGGCGACTTTGAAGATAT 737
|||||||||||.||..||||||||||||||||.||.|||||||||||.||
BPUM_0074___y 688 AAAGAATTAGATATCAAAGTTGAAATTTACGAGGGTGACTTTGAAGACAT 737
BSNT_00183___ 738 TCAGGAGGTTGACAGCAAGCTCGTCAAACTTGCTAAGCTGACATCCGGGG 787
|||.||||||||.||||||||.||.||.||.|||||..|.||.||.||.|
BPUM_0074___y 738 TCAAGAGGTTGATAGCAAGCTTGTGAAGCTCGCTAAATTAACTTCAGGTG 787
BSNT_00183___ 788 TCGTTGTGACGAATGATTTTAATTTAAATAAAGTGTGCGAGCTTCAGAAG 837
|.||||||||.|||||||||||||||||||||||.|||||.|||||.||.
BPUM_0074___y 788 TTGTTGTGACAAATGATTTTAATTTAAATAAAGTATGCGAACTTCAAAAA 837
BSNT_00183___ 838 GTAGCAGTATTAAACATTAATGACCTTGCCAATGCGGTCAAGCCTGTTGT 887
||||||||.||||||||.|||||.||.|||||||||||.||.||.|||||
BPUM_0074___y 838 GTAGCAGTGTTAAACATCAATGATCTAGCCAATGCGGTGAAACCGGTTGT 887
BSNT_00183___ 888 GCTTCCTGGCGAGGAAATGAATGTTCAGGTCATTAAGGACGGGAAAGAGC 937
|||.|||||.||.||||||||.||.|||||||||||.||.||||||||||
BPUM_0074___y 888 GCTGCCTGGGGAAGAAATGAAGGTACAGGTCATTAAAGATGGGAAAGAGC 937
BSNT_00183___ 938 ATAATCAGGGAGTTGCCTACTTGGATGACGGTACGATGATTGTCGTTGAA 987
||||.||.||.|||||.|||||.||||||||||||||||||||.||.|||
BPUM_0074___y 938 ATAACCAAGGTGTTGCTTACTTAGATGACGGTACGATGATTGTGGTCGAA 987
BSNT_00183___ 988 GAAGGACGCAATTATATCGGCAAGCATATTGATGTACTCGTCACAAGTGT 1037
||||||||||||||.||.||.||..|.||.|||||.||||||||||||||
BPUM_0074___y 988 GAAGGACGCAATTACATTGGAAAAGACATCGATGTGCTCGTCACAAGTGT 1037
BSNT_00183___ 1038 GCTGCAGACAGCAGCGGGACGAATGATTTTTGCGAAGCCTAAGCTGTTGG 1087
|||||||||.||.||.|||.|||||||||||||||||||.||.||..|||
BPUM_0074___y 1038 GCTGCAGACTGCTGCTGGAAGAATGATTTTTGCGAAGCCAAAACTTCTGG 1087
BSNT_00183___ 1088 AGAAGGCGCTGTAA 1101
||||||||||.|||
BPUM_0074___y 1088 AGAAGGCGCTCTAA 1101
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