Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00182 and BPUM_0073
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:06
# Commandline: needle
# -asequence dna-align/BSNT_00182___yacK.1.24716.seq
# -bsequence dna-align/BPUM_0073___disA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00182___yacK-BPUM_0073___disA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00182___yacK-BPUM_0073___disA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00182___yacK
# 2: BPUM_0073___disA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1099
# Identity: 832/1099 (75.7%)
# Similarity: 832/1099 (75.7%)
# Gaps: 35/1099 ( 3.2%)
# Score: 3091.0
#
#
#=======================================
BSNT_00182___ 1 ATGGAAAAAGAGAAAAAAGGGGCGA---AACACGA---GTTAGACCTGTC 44
||||||||||||||||||||.|||| |||.||| .|||||
BPUM_0073___d 1 ATGGAAAAAGAGAAAAAAGGAGCGAGAGAACTCGATCTCTTAGA------ 44
BSNT_00182___ 45 ATCTATATTGCAGTTTGTTGCTCCGGGTACACCGCTCAGAGCGGGGATGG 94
|||..|.||||||||.||.||.||.|||||.||..|.||.|||||.|
BPUM_0073___d 45 ---TATCGTACAGTTTGTGGCACCAGGGACACCTCTTCGGGCTGGGATCG 91
BSNT_00182___ 95 AAAACGTCTTGAGAGCAAATACAGGCGGTCTGATTGTTGTTGGATATAAT 144
||||||||.||||.||.|||||.|||||.||.|||||||||||.|||||.
BPUM_0073___d 92 AAAACGTCCTGAGGGCCAATACTGGCGGGCTAATTGTTGTTGGTTATAAC 141
BSNT_00182___ 145 GATAAAGTAAAAGAAGTG--GTGGACGGCGGCTTTCACATAAACACGGCT 192
||.|||||.|| .|||| ||.||.||.||.||||||||.||..|.||.
BPUM_0073___d 142 GACAAAGTGAA--GAGTGTTGTCGATGGAGGATTTCACATTAATTCTGCC 189
BSNT_00182___ 193 TTTTCTCCGGCGCATTTATATGAGTTGGCTAAAATGGATGGAGCGATCAT 242
||.||.||.||.||.||||||||.|||||.||.|||||||||||.|||||
BPUM_0073___d 190 TTCTCCCCAGCACACTTATATGAATTGGCGAAGATGGATGGAGCCATCAT 239
BSNT_00182___ 243 TTTAAGTGATTCGGGTCAAAAGATCCTCTACGCGAATACTCAGCTGATGC 292
||||||.|||||.||||||||||||.|.||.||||||||.|||||.||||
BPUM_0073___d 240 TTTAAGCGATTCTGGTCAAAAGATCTTGTATGCGAATACACAGCTTATGC 289
BSNT_00182___ 293 CGGATGCCACAATTTCTTCATCAGAAACAGGAATGCGGCACAGAACTGCC 342
|.|||||.||.||...||||||.|||||.||.|||.|||||.|.|||||.
BPUM_0073___d 290 CAGATGCGACCATCCATTCATCGGAAACGGGCATGAGGCACCGTACTGCT 339
BSNT_00182___ 343 GAAAGAGTAGCTAAGCAAACTGGCTGTCTTGTAATCGCTATTTCTGAAAG 392
|||.|.|||||.|||||.|||||||||.|..|.||.||.|||||||||.|
BPUM_0073___d 340 GAACGTGTAGCGAAGCAGACTGGCTGTTTAATCATTGCAATTTCTGAACG 389
BSNT_00182___ 393 AAGAAATGTCATAACGTTATATC-AGGAAAACATGAAGTATACA--CTAA 439
.||.||.|||||.||.|||||.| ||||||.| |..|| |||| ||.|
BPUM_0073___d 390 GAGGAACGTCATTACCTTATACCAAGGAAATC--GTCGT-TACACGCTGA 436
BSNT_00182___ 440 AAGACATAGGATTTATTTTAACCAAGGCGAACCAAGCCATTCAAACACTT 489
||||.||.||.|||||||||||.|||||.|||||||||||.|||||||||
BPUM_0073___d 437 AAGATATTGGCTTTATTTTAACGAAGGCTAACCAAGCCATACAAACACTT 486
BSNT_00182___ 490 GAAAAGTATAAGACAATCCTCGATAAAACGATTAATGCACTGAACGCGTT 539
||.||.|||||.||.||..|.|||.|..|.|||..|||..|.|.|||..|
BPUM_0073___d 487 GAGAAATATAAAACCATTTTAGATCACGCCATTTCTGCGTTAAGCGCCCT 536
BSNT_00182___ 540 AGAGTTTGAGGAACTTGTTACCTTCAGTGATGTCTTGTCTGTCATGCATC 589
.||.|||||.||.|||||.|||||..|||||||.||.||.||..||||||
BPUM_0073___d 537 GGAATTTGAAGAGCTTGTGACCTTTGGTGATGTATTATCCGTGCTGCATC 586
BSNT_00182___ 590 GTTATGAAATGGTACTGAGAATCAAAAACGAAATTAATATGTATATCAAA 639
||||.||.|||||.||.|||||||||||.|||||.|||||||||||||||
BPUM_0073___d 587 GTTACGAGATGGTGCTTAGAATCAAAAATGAAATCAATATGTATATCAAA 636
BSNT_00182___ 640 GAGCTGGGGACAGAAGGGCATCTGATCAAACTGCAAGTCATTGAATTGAT 689
|||||.||.||.|||||.|||.|||||...||||||||||.||||.||||
BPUM_0073___d 637 GAGCTTGGAACTGAAGGACATTTGATCCGTCTGCAAGTCAATGAACTGAT 686
BSNT_00182___ 690 TACGGATATGGAAGAAGAGGCCGCTTTATTTATTAAGGACTATGTAAAAG 739
|||.||||||||..|.||.||.||||||||||||||.||.||.||.||||
BPUM_0073___d 687 TACAGATATGGAGCAGGAAGCGGCTTTATTTATTAAAGATTACGTGAAAG 736
BSNT_00182___ 740 AAAAGATTAAAGATCCGTTTGTCCT-CTTGAAGGAGCTGCAGGATATGTC 788
||||||||||||||||.|.|||.|| ||| ||..||||.||.||||||||
BPUM_0073___d 737 AAAAGATTAAAGATCCATATGTTCTGCTT-AAACAGCTCCAAGATATGTC 785
BSNT_00182___ 789 CAGTTATGATCTGCTGGATGATTCCATTGTGTATAAGCTTCTCGGTTACC 838
.||.|.|||.||..|.||||||||||||.||||.|||.|.||.||.||.|
BPUM_0073___d 786 TAGCTTTGAGCTTTTAGATGATTCCATTCTGTACAAGTTACTAGGCTATC 835
BSNT_00182___ 839 CTGCTTCTACTAATCTTGATGATTATGTATTGCCGAGAGGATACAGGCTG 888
|.||||||||.|||.||||.||.|||||.|...|.|||||.|||||..||
BPUM_0073___d 836 CAGCTTCTACAAATATTGACGAATATGTGTACACAAGAGGTTACAGATTG 885
BSNT_00182___ 889 TTAAATAAGATACCGCGTCTTCCGATGCCGATTGTTGAAAATGTTGTAGA 938
.|..|.||.||.||..|.||.||.|||||.||.||.|||||.||.||.||
BPUM_0073___d 886 CTTCACAAAATCCCTAGACTGCCTATGCCAATCGTCGAAAACGTGGTTGA 935
BSNT_00182___ 939 AGCATTTGGAGTCCTGCCAA----GGATTATTGAGGCGAGTGCAGAAGAA 984
||||||.||.||..| | |.|||||.||.|||..||.|.||||.
BPUM_0073___d 936 AGCATTCGGTGTGTT----AGATCGAATTATGGAAGCGGATGTACAAGAT 981
BSNT_00182___ 985 TTAGATGAAGTAGAGGGAATCGGTGAAGTACGAGCCCAAAAAATCAAAAA 1034
||.|||||||||||.|||||.||.||||||.||||..||||.||.|||||
BPUM_0073___d 982 TTGGATGAAGTAGAAGGAATTGGAGAAGTAAGAGCGAAAAAGATAAAAAA 1031
BSNT_00182___ 1035 AGGATTAAAACGCCTGCAAGAGAAGCATTATTTAGACAGACAACTGTGA 1083
||||||||||.|..|||||||.||.||||||.|.||..||||.||||.|
BPUM_0073___d 1032 AGGATTAAAAAGGTTGCAAGAAAAACATTATATCGATCGACAGCTGTAA 1080
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