Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00174 and BPUM_0068
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence dna-align/BSNT_00174___ctsR.1.24716.seq
# -bsequence dna-align/BPUM_0068___ctsR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00174___ctsR-BPUM_0068___ctsR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00174___ctsR-BPUM_0068___ctsR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00174___ctsR
# 2: BPUM_0068___ctsR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 360/468 (76.9%)
# Similarity: 360/468 (76.9%)
# Gaps: 6/468 ( 1.3%)
# Score: 1351.0
#
#
#=======================================
BSNT_00174___ 1 GTGGGACATAATATTTCTGACATCATTGAACAATATTTAAAACGAGTGTT 50
||||.|||.|||||||||||.|||||.||.||.|||||.|||..|||.||
BPUM_0068___c 1 GTGGCACAAAATATTTCTGATATCATCGAGCAGTATTTGAAAGAAGTCTT 50
BSNT_00174___ 51 AGATCAAAATGG-CAAGGAAATTTTAGAGATTAAACGAAGTGAAATTGCA 99
.|||||.||||| |.| |||||.|||||.|||||.||.|.||||||||||
BPUM_0068___c 51 GGATCAGAATGGTCGA-GAAATATTAGAAATTAAGCGCAATGAAATTGCA 99
BSNT_00174___ 100 GATAAATTTCAATGCGTTCCTTCCCAAATAAATTATGTCATCAACACCAG 149
|||||.|||||||||||.|||||.|||||.||.|||||.|||||.||..|
BPUM_0068___c 100 GATAAGTTTCAATGCGTACCTTCACAAATTAACTATGTTATCAATACACG 149
BSNT_00174___ 150 ATTTACAAGCGAAAGAGGATATATTGTTGAGAGCAAACGCGGGGGCGGCG 199
.|||||.|||||.|||||.||.||.|||||.||.||.||.||.|||||.|
BPUM_0068___c 150 CTTTACGAGCGAGAGAGGCTACATCGTTGAAAGTAAGCGTGGCGGCGGTG 199
BSNT_00174___ 200 GTTACATCAGAATCATTAAAATTAAAATGAACAATGAAGTTGTCCTGATC 249
|.||.|||.|.|||||||||.|.||||||||..|||||||.|.|.|..|.
BPUM_0068___c 200 GCTATATCCGCATCATTAAAGTCAAAATGAATGATGAAGTCGACTTATTG 249
BSNT_00174___ 250 AATAATATAATTTCTCAAATTAATACC--CATTTGTCTCAAGCAGCCTCT 297
||.|||||.|||||.||||| |||.| |.|||.||.||.||.||||||
BPUM_0068___c 250 AACAATATTATTTCCCAAAT--ATATCATCGTTTATCACAGGCTGCCTCT 297
BSNT_00174___ 298 GATGACATTATTTTAAGGCTATTAGAAGACAAGGTAATTTCAGAAAGAGA 347
|||.|.||.||..|..|.||..|.|||.|.||..|..|.||.||||||||
BPUM_0068___c 298 GATCATATCATCATGCGTCTTGTCGAAAATAACATTTTATCTGAAAGAGA 347
BSNT_00174___ 348 AGCAAAAATGATGGTCAGTGTAATGGACCGCTCAGTTTTACACATTGACT 397
||||||.||||||.|||||||.||||||||.||.|||||.||||||||.|
BPUM_0068___c 348 AGCAAAGATGATGATCAGTGTCATGGACCGTTCTGTTTTGCACATTGATT 397
BSNT_00174___ 398 TACCTGAACGTGATGAATTAAGAGCGAGAATGATGAAGGCAATGCTGACT 447
|||||||||||||||||||..|.||..|.||||||||.||.|||.|.|.|
BPUM_0068___c 398 TACCTGAACGTGATGAATTGCGGGCTCGGATGATGAAAGCGATGTTAAAT 447
BSNT_00174___ 448 TCTTTAAAATTAAAATAA 465
.||||.||||||||.|||
BPUM_0068___c 448 GCTTTGAAATTAAAGTAA 465
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