Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00139 and BPUM_0065
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence dna-align/BSNT_00139___yacF.1.24716.seq
# -bsequence dna-align/BPUM_0065___yacF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00139___yacF-BPUM_0065___yacF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00139___yacF-BPUM_0065___yacF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00139___yacF
# 2: BPUM_0065___yacF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1004
# Identity: 801/1004 (79.8%)
# Similarity: 801/1004 (79.8%)
# Gaps: 4/1004 ( 0.4%)
# Score: 3169.0
#
#
#=======================================
BSNT_00139___ 1 TTGTTCAAAATTGGAGATATTCA-ATTGAAAAACCGGGTTGTGCTCGCAC 49
.||||.|||||.||||||||..| ||| ||||||...||.||||||||||
BPUM_0065___y 1 ATGTTTAAAATCGGAGATATCGACATT-AAAAACAAAGTGGTGCTCGCAC 49
BSNT_00139___ 50 CTATGGCTGGTGTCTGCAACTCTGCGTTCAGATTGACTGTAAAGGAATTC 99
|||||||||||||.||||||||.||.||||||.||||.||.||.|||||.
BPUM_0065___y 50 CTATGGCTGGTGTGTGCAACTCCGCCTTCAGACTGACAGTGAAAGAATTT 99
BSNT_00139___ 100 GGAGCCGGATTGGTATGCGCTGAAATGGTCAGTGACAAAGCGATCCTTTA 149
|||||.||.||.||.||||||||||||||||||||.||.||||||||...
BPUM_0065___y 100 GGAGCAGGTTTAGTCTGCGCTGAAATGGTCAGTGATAAGGCGATCCTGAT 149
BSNT_00139___ 150 CAACAATGCAAGAACAATGGGTATGCTTTATATTGATGAACGTGAGAAAC 199
|||||||||||||||||||||||||||.||.|||||||||||.||.||.|
BPUM_0065___y 150 CAACAATGCAAGAACAATGGGTATGCTATACATTGATGAACGGGAAAAGC 199
BSNT_00139___ 200 CACTGAGCCTTCAAATTTTCGGAGGAAAAAAGGAAACCCTTGTGGAAGCG 249
|..||||||||||.||.||.||||||.||||.||.||.||.||.||||||
BPUM_0065___y 200 CTTTGAGCCTTCAGATATTTGGAGGAGAAAAAGACACTCTCGTTGAAGCG 249
BSNT_00139___ 250 GCGAAGTTTGTAGACCAAAACACAACTGCTGATATCATTGATATTAACAT 299
||.||||||||||||||.||.||.||.||.||.||.||||||||.|||||
BPUM_0065___y 250 GCAAAGTTTGTAGACCAGAATACCACAGCGGACATTATTGATATCAACAT 299
BSNT_00139___ 300 GGGATGTCCCGTGCCGAAGATTACAAAATGCGATGCGGGAGCCAAATGGC 349
|||.|||||.||||||||||||||.|||||.|||||.|||||.|||||||
BPUM_0065___y 300 GGGCTGTCCTGTGCCGAAGATTACGAAATGTGATGCAGGAGCGAAATGGC 349
BSNT_00139___ 350 TTCTCGATCCTGATAAGATTTACGAAATGGTTTCTGCAGTAGTGGATGCT 399
|.||.|||||..|.||.|||||.||||||||.||.||.||.||.||||||
BPUM_0065___y 350 TGCTTGATCCAAACAAAATTTATGAAATGGTCTCAGCTGTTGTAGATGCT 399
BSNT_00139___ 400 GTTAATAAGCCAGTTACAGTGAAAATGAGAATGGGCTGGGATGAAGACCA 449
||..||||.||.|||||.|||||||||||||||||||||||||||||.||
BPUM_0065___y 400 GTAGATAAACCTGTTACCGTGAAAATGAGAATGGGCTGGGATGAAGATCA 449
BSNT_00139___ 450 CATTTTCGCAGTGAAAAATGCACAGGCTGTAGAACGTGCGGGCGGTAAAG 499
.||.|||||..|..|.|||||||..|||||.|||||.||.||.||..|||
BPUM_0065___y 450 TATCTTCGCTATCGACAATGCACGTGCTGTTGAACGAGCAGGTGGACAAG 499
BSNT_00139___ 500 CAGTGGCGCTTCACGGCCGTACGAGAGTGCAGATGTACGAAGGAACGGCA 549
||||.||.||||||||.||.||..|.||||||||||||||||||||.|||
BPUM_0065___y 500 CAGTTGCACTTCACGGACGGACACGTGTGCAGATGTACGAAGGAACAGCA 549
BSNT_00139___ 550 AACTGGGATATCATCAAAGAAGTAAAACAATCAGTATCGATTCCGGTTAT 599
||.||||||||.||.|||||.||.||||||||.||.||.|||||.||.||
BPUM_0065___y 550 AATTGGGATATTATAAAAGAGGTCAAACAATCTGTTTCCATTCCTGTCAT 599
BSNT_00139___ 600 CGGAAACGGCGATGTTAAGACACCGCAGGATGCTAAGCGTATGCTCGATG 649
|||.||.||.|||||.||.||.||.||||||||.||.||||||||.||||
BPUM_0065___y 600 CGGCAATGGAGATGTCAAAACCCCTCAGGATGCAAAACGTATGCTTGATG 649
BSNT_00139___ 650 AGACAGGAGTAGACGGGGTCATGATCGGACGCGCTGCATTGGGTAACCCG 699
|.||.||.|.|||.|..||||||||||||.|.||.|||.|.||.||||||
BPUM_0065___y 650 AAACGGGTGCAGATGCTGTCATGATCGGAAGAGCGGCACTAGGAAACCCG 699
BSNT_00139___ 700 TGGATGATTTACCGTACGGTTCAGTATCTTGAAACAGGTAAATTAAAAGA 749
||||||||.||.||.||.|||||.|||.|.|||||.|||.||.|.|||||
BPUM_0065___y 700 TGGATGATCTATCGAACAGTTCATTATTTAGAAACGGGTGAACTGAAAGA 749
BSNT_00139___ 750 AGAGCCGCAAGTACGCGAAAAAATGGCCGTATGCAAACTGCATCTT-GAC 798
||||||..|.|||||.||.||.|||.|.||.||.||.||.|| ||| |||
BPUM_0065___y 750 AGAGCCAAACGTACGTGAGAAGATGTCAGTGTGTAAGCTTCA-CTTAGAC 798
BSNT_00139___ 799 CGCCTGATTGACTTAAAAGGTGAAAACGTAGCGGTAAGAGAAATGAGAAA 848
.|.||.|||||..|||||||.||..|.||.||.||.||||||||||||||
BPUM_0065___y 799 AGACTTATTGATCTAAAAGGGGAGCATGTGGCTGTCAGAGAAATGAGAAA 848
BSNT_00139___ 849 GCACGCTGCATGGTATCTGAAAGGCGTGAAAGGCAATGCGAACGTTCGTA 898
||||||.||||||||..|.|||||.||...||||||||||.||||..|.|
BPUM_0065___y 849 GCACGCAGCATGGTACTTAAAAGGTGTCCGAGGCAATGCGGACGTGAGAA 898
BSNT_00139___ 899 ATGAAATCAATCATTGCGAGACGAGAGAAGAGTTTGTACAGCTTTTAGAT 948
||.||||||||||..|.||.|||||||..|||.|||||||..||.|.|||
BPUM_0065___y 899 ATCAAATCAATCAAAGTGAAACGAGAGCGGAGCTTGTACAAGTTCTTGAT 948
BSNT_00139___ 949 GCATTTACGGTTGAAGTTGAGGCAAAAGAGCTTCAAAATGCAAAAGTAGG 998
|..||||||.|.||||..|||||||||||||||||||.|..|||||||||
BPUM_0065___y 949 GACTTTACGATCGAAGCCGAGGCAAAAGAGCTTCAAAGTATAAAAGTAGG 998
BSNT_00139___ 999 ATAA 1002
||||
BPUM_0065___y 999 ATAA 1002
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