Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00136 and BPUM_0063
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence dna-align/BSNT_00136___folK.1.24716.seq
# -bsequence dna-align/BPUM_0063___folK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00136___folK-BPUM_0063___folK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00136___folK-BPUM_0063___folK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00136___folK
# 2: BPUM_0063___folK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 538
# Identity: 363/538 (67.5%)
# Similarity: 363/538 (67.5%)
# Gaps: 68/538 (12.6%)
# Score: 1191.5
#
#
#=======================================
BSNT_00136___ 1 ATGAACAACATAGCTTATATTGCACTTGGATCTAATATTGGAGATAGA-G 49
||||||||.|..||.||.|||||..|.||.||.||.||.|| ||.|.| |
BPUM_0063___f 1 ATGAACAATACCGCATACATTGCTTTAGGTTCGAACATAGG-GAAAAAGG 49
BSNT_00136___ 50 AAACGTATTTAAGGCAAGCAGTGGCTTC-----ACTGCATCAGCATGCTG 94
||||.|||||||...|||| |.|| |||.||..|.|||.|.|
BPUM_0063___f 50 AAACTTATTTAAAAGAAGC-----CGTCAAAAAACTACACGAACATCCAG 94
BSNT_00136___ 95 CGGTGACAGTCACTAAAG------TGTCGTCTATTTACGAAACTGAC-CC 137
.|||...||| || |.||.|||||.||.||||| .|| ||
BPUM_0063___f 95 AGGTTCAAGT------AGAATCGATCTCTTCTATATATGAAAC-AACACC 137
BSNT_00136___ 138 GGTCGGATACGAAGATCAAGCTCAATTTTTGAATATGGCTGTTGAAATCA 187
.||.||.||||||.|.||||.|.|.|||||.|||||||||||..||||
BPUM_0063___f 138 TGTAGGTTACGAAAACCAAGATGACTTTTTAAATATGGCTGTGAAAAT-- 185
BSNT_00136___ 188 AGACATCATTGAACC---CTT-------TTGAACTCCTTGAACTGACGCA 227
||..||| ||| .||||.|.||.|.|||.||.||
BPUM_0063___f 186 --------TTCCACCTCGCTTCGTCCAAATGAATTACTGGCACTTACTCA 227
BSNT_00136___ 228 GCAGATAGAAAATGAATTAGGCAGAACAAGGGAAGTAAGATGGGGGCCGC 277
|.|.||.||..|.||.|||||||||||.||.|||||.||||||||.||.|
BPUM_0063___f 228 GAAAATCGAGCAAGAGTTAGGCAGAACGAGAGAAGTGAGATGGGGACCAC 277
BSNT_00136___ 278 GGACGGCAGACCTTGACATTTTGTTATTTAATCGTGAAAATATTGAATCA 327
|.|||||.||||||||||||||..|.|.|||||||||||||||||||.||
BPUM_0063___f 278 GAACGGCTGACCTTGACATTTTACTTTATAATCGTGAAAATATTGAAACA 327
BSNT_00136___ 328 GAGCAACTAATTGTTCCGCATCCGAGAATGTATGAGCGTTTGTTTGTCCT 377
||.||.||..|.||.||.|||||.||||||||.||.|||||.||.||.||
BPUM_0063___f 328 GAACAGCTCGTAGTGCCACATCCTAGAATGTACGAACGTTTATTCGTTCT 377
BSNT_00136___ 378 TGCGCCGCTTGCG-GAAATTTGCCAGCAGGTTGAAA------AAGAGGCT 420
.|..||| .||.| ||.|||||||.| |||| ||| |
BPUM_0063___f 378 CGTTCCG-ATGAGTGAGATTTGCCCG------GAAATCGGCGAAG----T 416
BSNT_00136___ 421 AC----AAGCGCCGAAACAGACCAAGAAGGTGTAAGAGTATGGAAGCAGA 466
|| ||..||||.|||||||||||||||||||||..|||||||..|||
BPUM_0063___f 417 ACAAATAAATGCCGTAACAGACCAAGAAGGTGTAAGCATATGGAAAAAGA 466
BSNT_00136___ 467 AATCTGGGGTAGACGAATTCGTGCATTCAGAAAGCTGA 504
..|.|||||||||.||||||||||||.|.|||||||.|
BPUM_0063___f 467 CGTGTGGGGTAGAAGAATTCGTGCATACCGAAAGCTAA 504
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