Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00134 and BPUM_0061
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence dna-align/BSNT_00134___sul.1.24716.seq
# -bsequence dna-align/BPUM_0061___sul.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00134___sul-BPUM_0061___sul.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00134___sul-BPUM_0061___sul.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00134___sul
# 2: BPUM_0061___sul
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 883
# Identity: 625/883 (70.8%)
# Similarity: 625/883 (70.8%)
# Gaps: 50/883 ( 5.7%)
# Score: 1992.5
#
#
#=======================================
BSNT_00134___ 1 ATGGCGCAGCACACAATAGATCAAACA----CAAGTCATCCACACTAAGC 46
|||.|.|| ||||..|||.||.|| .|||||||.||..|.||||
BPUM_0061___s 1 ATGACACA----ACAAGTGATAAAGCAGCCTAAAGTCATACAAGCCAAGC 46
BSNT_00134___ 47 -CCA-GCGCTTTATCATATAAAGAGAAGACGCTGGTGATGGGAATTTTAA 94
||| .|.|||..| |||.||||.|||||..||||.|||||.|||||||
BPUM_0061___s 47 ACCACACCCTTAGT--TATGAAGAAAAGACATTGGTCATGGGCATTTTAA 94
BSNT_00134___ 95 ACGTAACGCCTGACTCTTTCTCGGACGGCGGAAAAT---ATGACAGCTTG 141
|.||.||.|||||||||||.||.||.||.|||||.| ||.| || ||
BPUM_0061___s 95 ATGTCACACCTGACTCTTTTTCAGATGGAGGAAAGTTTAATCA-AG--TG 141
BSNT_00134___ 142 GACAAGGCGCT-GCTGCACGCGAAAGAGATGATCGATGATGGTGCCCATA 190
||.||.||||| ||| ||.||...|.||.||||.||.||.||.||.||||
BPUM_0061___s 142 GATAAAGCGCTGGCT-CATGCAGCACAGCTGATAGAGGACGGGGCACATA 190
BSNT_00134___ 191 TCATTGATATCGGAGGGGAATCGACAAGGCCTGGCGCTGAGTGGGTATCT 240
||||||||||.||.||.||||||||..|.||.||.||.|..|..||.||.
BPUM_0061___s 191 TCATTGATATAGGCGGAGAATCGACTCGCCCAGGAGCGGCATTTGTCTCA 240
BSNT_00134___ 241 GAGGATGAGGAGATGTCCAGAGTCATTCCGGTGATTGAGCGGATTACGAA 290
||..|.||.|||.|.||.|||||||||||.||.||.||...|||.||.||
BPUM_0061___s 241 GAACAAGAAGAGCTTTCAAGAGTCATTCCCGTCATCGAAAAGATCACAAA 290
BSNT_00134___ 291 AGAGCTTGG-TGTTCCTATTTCTGTAGATACGTACAAGGCTTCTGTCGCA 339
||| .|||| ||||||.||||||.|.||||||||.||.|||..|||.|||
BPUM_0061___s 291 AGA-ATTGGATGTTCCAATTTCTATTGATACGTATAAAGCTCATGTAGCA 339
BSNT_00134___ 340 GATGAAGCAGTGAAAGCCGGCGCATCCATTATCAATGATATTTGGGGTGC 389
|||||||||||||||||.||.||.|||||.||.||||||.|.|||||.||
BPUM_0061___s 340 GATGAAGCAGTGAAAGCTGGAGCTTCCATCATTAATGATGTATGGGGAGC 389
BSNT_00134___ 390 CAA-ACATGATCCGAAGATGGCTTCCGTTGCAGCTGAA-CATAATGTTCC 437
.|| .|| |||||..|.|||||...|||.||||| ||| ||.|||||.||
BPUM_0061___s 390 GAAGGCA-GATCCTCAAATGGCGCACGTAGCAGC-GAAGCACAATGTGCC 437
BSNT_00134___ 438 AATTGTTCTCATGCATAACCGCCCTGAAAGAAACTACA---ATGACTTAT 484
||||.||.|.|||||.||.||.||.|||.||||.|||| || ||.||
BPUM_0061___s 438 AATTATTTTAATGCACAATCGGCCAGAACGAAATTACACACAT--CTAAT 485
BSNT_00134___ 485 TGCCGGATATGCTGTCGGACTT-AATGGAGAGTGTAAAAATTGCTGTTGA 533
| .|.||||||.|..|.||.|| ||| ||.|||||..|||||||.....|
BPUM_0061___s 486 T-TCAGATATGATCGCAGATTTGAAT-GAAAGTGTTCAAATTGCAAAACA 533
BSNT_00134___ 534 GGCCGGAGT---AGACGAGAAGAACATTATTCTTGATCCCGGTATCGGTT 580
.||.||.|| .||.||.|.||.|| ||| |.||.||.|||||.||.|
BPUM_0061___s 534 AGCGGGTGTCCGTGATGACATGATCA-TAT--TAGACCCAGGTATAGGGT 580
BSNT_00134___ 581 TCGCGAAAACCTATCACGATAACTTGGCAGTGATGAACAAACTAG-AGAT 629
|.|||||||...|..|.||.|||.||...||.|||||..|.||.| |.||
BPUM_0061___s 581 TTGCGAAAAATAAAGAGGACAACCTGATGGTCATGAATGAGCTTGAACAT 630
BSNT_00134___ 630 TT---TCAGCGGAGTGGGATATCCGGTTCTTCTGGCAACCTCCCGAAAAA 676
|| ||||| |.||.|||||..|.||..|.||.||.||.||||||.
BPUM_0061___s 631 TTTTGTCAGC----TCGGGTATCCACTGCTCTTAGCTACATCTCGAAAAC 676
BSNT_00134___ 677 GATTCATCGG-GCGTGTTCTGGATCTTCCGCCTGAGGAGCGGGCTGAGGG 725
|||||||||| || |||..|.||.||.||.||.||.|||||..||||.||
BPUM_0061___s 677 GATTCATCGGAGC-TGTCTTAGACCTGCCACCGGAAGAGCGTACTGAAGG 725
BSNT_00134___ 726 CACAGGCGCGACTGTGTGTCTCGGCATTCAAAAAGGCTGTGACATTGTCA 775
.||.||.|||||.||.||.||.||.||||||||||||.|||..||.||..
BPUM_0061___s 726 AACGGGGGCGACGGTCTGCCTTGGAATTCAAAAAGGCAGTGCGATGGTTC 775
BSNT_00134___ 776 GGGTCCATGATGTAAAGCAAATTGCCAGAATGGCGAAAATGATGGACGCG 825
||||.|||||||||||..||||.||.||||||||.|||||||||||.||.
BPUM_0061___s 776 GGGTACATGATGTAAAAGAAATCGCAAGAATGGCAAAAATGATGGATGCC 825
BSNT_00134___ 826 ATGCTGAATAAGGGAGGGGTGCACCATGGATAA 858
|||||||||||||||||.|...|.|||.|||||
BPUM_0061___s 826 ATGCTGAATAAGGGAGGCGCTTATCATCGATAA 858
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