Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_00124 and BPUM_0055

See Amino acid alignment / Visit BSNT_00124 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:04
# Commandline: needle
#    -asequence dna-align/BSNT_00124___hslO.1.24716.seq
#    -bsequence dna-align/BPUM_0055___hslO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00124___hslO-BPUM_0055___hslO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00124___hslO-BPUM_0055___hslO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00124___hslO
# 2: BPUM_0055___hslO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 887
# Identity:     663/887 (74.7%)
# Similarity:   663/887 (74.7%)
# Gaps:          22/887 ( 2.5%)
# Score: 2401.0
# 
#
#=======================================

BSNT_00124___      1 ATGGATTATTTAGTAAAAGCACTTGCGTATGACGGAAAAGTTCGGGCTTA     50
                     ||||||||.|||||.|||||..|.||.|||||||||||||||||.||.||
BPUM_0055___h      1 ATGGATTACTTAGTTAAAGCGTTAGCATATGACGGAAAAGTTCGAGCATA     50

BSNT_00124___     51 TGCGGCGAGAACGACTGATATGGTAAATGAGGGGCAGAGACGCCATGGTA    100
                     |||.||.|..||.||.||||...|.||.||.|..||.|||.|.||...||
BPUM_0055___h     51 TGCTGCAAACACAACAGATACAATCAACGAAGCACAAAGAAGACACCATA    100

BSNT_00124___    101 CGTGGCCGACAGCATCCGCTGC-ATTGGGCCGCACAATGACAGCTTCACT    149
                     |.|||||.||||||||.||.|| ||| |||.|.||||||||.||..||.|
BPUM_0055___h    101 CATGGCCAACAGCATCAGCAGCGATT-GGCAGAACAATGACTGCCACAGT    149

BSNT_00124___    150 TATGCTCGGCGCTATGCTGAAGGGCGATGATAAGCTGACCGTGAAAATCG    199
                     .|||.|.||.|||||||||||.||.||..||||..|.||.||.|||||.|
BPUM_0055___h    150 CATGATGGGTGCTATGCTGAAAGGTGAAAATAAATTAACGGTCAAAATTG    199

BSNT_00124___    200 AGGGCGGAGGTCCGATCGGAGCTATTGTAGCTGATGCCAATGCCAAAGGA    249
                     |.|||||.||.||.|||||.||.||..|.|||||||..||.| |||||| 
BPUM_0055___h    200 AAGGCGGTGGACCAATCGGTGCCATCATTGCTGATGGAAACG-CAAAGG-    247

BSNT_00124___    250 GAAGTCA-----GAGCCTATGTCTCTAACCCGCAAGTTCATTTTGATTTA    294
                        ||||     |.|..||||||||.||.||.|||||.||.|||||..||
BPUM_0055___h    248 ---GTCAGGTGCGCGGATATGTCTCAAATCCACAAGTCCACTTTGACCTA    294

BSNT_00124___    295 AATGAACAAGGCAAGCTTGATGTCAGACGTGCGGTTGGAACAAACGGAAC    344
                     ||||||||.|||||.||.|||||.||||||||.||.||.|||...|||||
BPUM_0055___h    295 AATGAACATGGCAAACTGGATGTTAGACGTGCAGTCGGGACATCTGGAAC    344

BSNT_00124___    345 GTTAAGTGTCGTAAAAGATTTAGGTTTGCGCGAGTTCTTCACAGGACAAG    394
                     |||||||||.||.||||||.|.||..||...||...|||.|||||||||.
BPUM_0055___h    345 GTTAAGTGTTGTGAAAGATATCGGGCTGAAAGATCACTTTACAGGACAAA    394

BSNT_00124___    395 TAGAAATCGTTTCAGGAGAATTAGGCGATGATTTCACTTACTATCTTGTA    444
                     ..||.|||||||||||.|||.|.||.|||||.||||||||.||||||||.
BPUM_0055___h    395 CGGAGATCGTTTCAGGTGAAATTGGAGATGACTTCACTTATTATCTTGTC    444

BSNT_00124___    445 TCATCTGAGCAGGTTCCTTCATCAGTGGGCGTAGGTGTGCTCGTAAATCC    494
                     ||.||||||||.||.|||||.||.||.||.|||||.||.|||||.|||||
BPUM_0055___h    445 TCTTCTGAGCAAGTACCTTCTTCTGTAGGTGTAGGAGTTCTCGTCAATCC    494

BSNT_00124___    495 TGACAATACCATTCTTGCGGCAGGGGGCTTTATTATTCAGCTGATGCCGG    544
                     .||.||..|.|||||.||.||.||.||.||.||.|||||..||.||||.|
BPUM_0055___h    495 AGATAACTCGATTCTCGCAGCTGGCGGTTTCATCATTCAATTGCTGCCTG    544

BSNT_00124___    545 GAACAGATGATGAAACAATCA--CAAAAATT-GAACAGCGTCTATCTCAA    591
                     |||||||.||||   |..|||  .|||.||| |||.||||||  ||||||
BPUM_0055___h    545 GAACAGAAGATG---CTGTCATTGAAAGATTAGAAAAGCGTC--TCTCAA    589

BSNT_00124___    592 --GTAGAGCCGATTTCTAAGCTCATCCAAAAAGGGCTGACACCAGAAGAA    639
                       .|.||.||.||||||||.|||||..||||||||.||||||||||||||
BPUM_0055___h    590 CCATTGAACCCATTTCTAAACTCATTGAAAAAGGGATGACACCAGAAGAA    639

BSNT_00124___    640 ATTTTAGAAGAAGTCCTAGGCGAGAAACCTGAGATTTTGGAAACGATGCC    689
                     ||||||||||||||.||.||.||.||||||.|.|||||.|||||..|.||
BPUM_0055___h    640 ATTTTAGAAGAAGTACTCGGAGAAAAACCTCAAATTTTAGAAACTGTACC    689

BSNT_00124___    690 TGTCAGATTCCATTGCCCTTGTTCAAAAGAACGGTTCGAAACAGCCATTT    739
                     ||||..||||..|||....||.|||||||||||.||.|..|..|.||||.
BPUM_0055___h    690 TGTCGAATTCTCTTGTAACTGCTCAAAAGAACGTTTTGCTAATGGCATTA    739

BSNT_00124___    740 TGGGACTAGGCAAAAAAGAAATTCAAGATATGATAGAAGAAGATGGACAA    789
                     |..|.|||||.|||...||||||.|.||||||||.|||.||||.||||||
BPUM_0055___h    740 TCAGCCTAGGGAAAGCCGAAATTGACGATATGATTGAACAAGACGGACAA    789

BSNT_00124___    790 GCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGA    839
                     ||.|||||...|||||||||||||||.||||.|||..|||||||||||||
BPUM_0055___h    790 GCAGAAGCTCAATGCCATTTTTGTAACGAAACGTATGTATTTACAAAAGA    839

BSNT_00124___    840 AGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAA    876
                     ||||||.||||.|||.|||||..|||..|||||||||
BPUM_0055___h    840 AGAGCTAGAAGAGCTACGTGAAGAAATAACCCGCTAA    876


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00124 and BPUM_0055

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
