Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00121 and BPUM_0053
See
Amino acid alignment /
Visit
BSNT_00121 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:04
# Commandline: needle
# -asequence dna-align/BSNT_00121___ftsH.1.24716.seq
# -bsequence dna-align/BPUM_0053___ftsH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00121___ftsH-BPUM_0053___ftsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00121___ftsH-BPUM_0053___ftsH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00121___ftsH
# 2: BPUM_0053___ftsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1948
# Identity: 1494/1948 (76.7%)
# Similarity: 1494/1948 (76.7%)
# Gaps: 77/1948 ( 4.0%)
# Score: 5648.0
#
#
#=======================================
BSNT_00121___ 1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT 50
|||||||||||.||.||||||||.|||||||||.||||||||||||||.|
BPUM_0053___f 1 ATGAATCGGGTTTTTCGTAATACGATTTTTTATATACTTATTTTATTACT 50
BSNT_00121___ 51 AGTAATCGGGGTTGTGAGCTACTTCCAG--ACCTCAAATCCGAAAA--CA 96
.||.||.|||||.||.||.|..|| || .||.|.|||| |||| |.
BPUM_0053___f 51 TGTGATAGGGGTAGTCAGTTGGTT--AGGATCCCCTAATC--AAAAGCCT 96
BSNT_00121___ 97 GAAAATATGTCGTACAGTACGTTCATC-AAAAACCTGGATGACGGG-AAA 144
||.||.|||||.|||||.|..|| .|| .||||.||...|| |||| |||
BPUM_0053___f 97 GAGAACATGTCTTACAGCAAATT-TTCGCAAAATCTAAGTG-CGGGAAAA 144
BSNT_00121___ 145 GTTGATAGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGA-------GG 187
||.||.||..|.||..||||||||||.|||||.|||||||| ||
BPUM_0053___f 145 GTGGAGAGTATCTCCATTCAGCCTGTAAGAGGGGTTTATGAAATTCGTGG 194
BSNT_00121___ 188 TAAA----AGGGCAGCTGAAAAACTACGACAAAGATCAATACTTTTTGAC 233
|.|| |.||| || || |.||||||.|||||||..|.||
BPUM_0053___f 195 TCAATTAGATGGC-GC-GA---------AGAAAGATGAATACTTCATTAC 233
BSNT_00121___ 234 TCATGTTCCTGAAGGAAAGGGAGCAGACCAGATATTTAACGCTTTGAAAA 283
.||||||||.||.||..|.||.|..||||||||.|..|..||..||||.|
BPUM_0053___f 234 CCATGTTCCAGATGGTCAAGGTGTTGACCAGATTTACAGTGCACTGAAGA 283
BSNT_00121___ 284 AGACAGACGTAAAGGTTGAGCCCGCTCAAGAAACAAGCGGATGGGTG-AC 332
|.|||||.|||||.||.||.||.||.|..|||||||..||||||.|| |.
BPUM_0053___f 284 ATACAGATGTAAAAGTAGAACCAGCACCTGAAACAAATGGATGGCTGCAA 333
BSNT_00121___ 333 GTTCCTGACGACCATCATCCCATTTGTCATTATCTTTATTCTGTTTTTCT 382
||| |||||.||||||||.||.||..||||.||||||||.|||||.||||
BPUM_0053___f 334 GTT-CTGACAACCATCATTCCGTTCATCATCATCTTTATCCTGTTCTTCT 382
BSNT_00121___ 383 TCCTGCTCAATCAGGCTCAAGGTGGCGGCAGCCGTGTCATGAACTTTGGC 432
||.|..|.||.||.|||||.||.||.||.||||||||||||||||||||.
BPUM_0053___f 383 TCTTATTGAACCAAGCTCAGGGCGGTGGAAGCCGTGTCATGAACTTTGGT 432
BSNT_00121___ 433 AAGAGTAAAGCGAAGCTGTATACAGAGGAAAAGAAACGCGTCAAATTTAA 482
||||||||.||||||||.||.|||||.||.||||||||.||.||||||||
BPUM_0053___f 433 AAGAGTAAGGCGAAGCTTTACACAGAAGAGAAGAAACGTGTGAAATTTAA 482
BSNT_00121___ 483 AGACGTTGCAGGGGCTGACGAAGAAAAGCAAGAACTTGTTGAAGTTGTTG 532
|||.|||||.||.||.||.||||||||||||||||||||.|||||.||||
BPUM_0053___f 483 AGATGTTGCCGGTGCAGATGAAGAAAAGCAAGAACTTGTAGAAGTGGTTG 532
BSNT_00121___ 533 AGTTTCTGAAAGATCCCCGCAAGTTTGCCGAGCTTGGCGCCAGAATACCG 582
|.||.|||||.|||||.||.||.||.||.|||||||||||.|||||.||.
BPUM_0053___f 533 AATTCCTGAAGGATCCACGTAAATTCGCGGAGCTTGGCGCAAGAATTCCT 582
BSNT_00121___ 583 AAAGGCGTGCTTT--TAGTCGGACCTCCGGGTACCGGTAAAACATTGCTT 630
|||||.|| ||| ||||.||||||||.|||||.|||||||||||||||
BPUM_0053___f 583 AAAGGGGT--TTTACTAGTAGGACCTCCAGGTACAGGTAAAACATTGCTT 630
BSNT_00121___ 631 GCCAAGGCTTGTGCAGGTGAAGCCGGCGTACCTTTCTTCAGCATCAGCGG 680
||.|..||.|.|||.||.|||||.|||||.||||||||.||||||||.||
BPUM_0053___f 631 GCGAGAGCATCTGCTGGAGAAGCAGGCGTTCCTTTCTTTAGCATCAGTGG 680
BSNT_00121___ 681 ATCTGATTTCGTTGAAATGTTTGTAGGGGTCGGTGCTTCCCGTGTGCGTG 730
.|||||.|||||.||.|||||.||.||.||||||||.||.|||||.||||
BPUM_0053___f 681 TTCTGACTTCGTCGAGATGTTCGTCGGTGTCGGTGCATCACGTGTACGTG 730
BSNT_00121___ 731 ACTTGTTTGAAAATGCAAAAAAGAATGCGCCTTGTTTGATTTTCATTGAT 780
|.||.||.||||||||.|||||||||||.||.||.||.||.||.||||||
BPUM_0053___f 731 ATTTATTCGAAAATGCGAAAAAGAATGCACCATGCTTAATCTTTATTGAT 780
BSNT_00121___ 781 GAAATTGATGCAGTCGGACGCCAGCGTGGTGCTGGTCTCGGCGGTGGACA 830
||.|||||||||||.||.||.||||||||.||.|||||.||||||||.||
BPUM_0053___f 781 GAGATTGATGCAGTGGGTCGTCAGCGTGGAGCAGGTCTTGGCGGTGGTCA 830
BSNT_00121___ 831 CGATGAACGTGAACAGACGCTAAACCAATTGCTTGTTGAAATGGACGGAT 880
.||.||.||||||||.|||||.|||||..|.||||||||||||||.||.|
BPUM_0053___f 831 TGACGAGCGTGAACAAACGCTTAACCAGCTTCTTGTTGAAATGGATGGTT 880
BSNT_00121___ 881 TCAGCGCTAATGAAGGAATTATCATCATTGCTGCGACGAACCGTGCGGAC 930
|.||.||.||.|||||.|||||.|||||.||||||||.||||||||.||.
BPUM_0053___f 881 TTAGTGCGAACGAAGGTATTATTATCATCGCTGCGACAAACCGTGCAGAT 930
BSNT_00121___ 931 ATCTTGGACCCAGCCTTACTTCGTCCGGGACGTTTTGACCGTCAAATCAC 980
|||.|.||.||.||.||.||.||||||||||||||||||||||||||.||
BPUM_0053___f 931 ATCCTAGATCCTGCATTGCTGCGTCCGGGACGTTTTGACCGTCAAATTAC 980
BSNT_00121___ 981 AGTGGACCGCCCAGATGTCATTGGCCGTGAAGCTGTATTGAAAGTCCATG 1030
.||.||||||||||||||||||||||||||||..|||.||||.||.||||
BPUM_0053___f 981 GGTTGACCGCCCAGATGTCATTGGCCGTGAAGAAGTACTGAAGGTTCATG 1030
BSNT_00121___ 1031 CGAGAAACAAACCGCTGGATGAAACGGTTAACCTAAAATCAATTGCCATG 1080
|||.||||||||||||.|||||.||.||.|||.|.|||.|.|||||.|..
BPUM_0053___f 1031 CGAAAAACAAACCGCTTGATGACACAGTGAACTTGAAAGCCATTGCAAGC 1080
BSNT_00121___ 1081 AGAACACCAGGCTTCTCAGGCGCTGA-CTT-AGAAAATCTCT---TGAAT 1125
||||||||.||.|||||.||.||.|| ||| |||| || |.||.
BPUM_0053___f 1081 AGAACACCTGGGTTCTCTGGAGCAGATCTTGAGAA-----CTTACTAAAC 1125
BSNT_00121___ 1126 GAAGCTGCGCTTGTAGCAGCTCGTCAAAACAAGAAAAAAATCGATGCGCG 1175
|||||.||.|||||.||.||.|||||.|||||.||.|||||.|||..|||
BPUM_0053___f 1126 GAAGCAGCACTTGTTGCTGCCCGTCATAACAAAAAGAAAATTGATATGCG 1175
BSNT_00121___ 1176 TGATATTGACGAAGCGACGGACCGTGTAATTGCCGGACCTGCTAAGAAGA 1225
||||||.|||||||||||.||||||||.||.||.|||||.||.|||||.|
BPUM_0053___f 1176 TGATATCGACGAAGCGACTGACCGTGTTATCGCTGGACCGGCGAAGAAAA 1225
BSNT_00121___ 1226 GCCGCGTTATCTCCAAGAAAGAACGCAATATCGTGGCTTATCACGAAGGC 1275
||||.||.||.||.|||||||||||.|||||||||||.||.||.||||..
BPUM_0053___f 1226 GCCGTGTCATTTCGAAGAAAGAACGTAATATCGTGGCGTACCATGAAGCA 1275
BSNT_00121___ 1276 GGACACACCGTTATCGGACTCGTTTTAGATGAGGCAGATATGGTTCATAA 1325
||.||.||.||.||.||.||..|..||||.||.||.||.|||||.|||||
BPUM_0053___f 1276 GGTCATACTGTCATTGGTCTTATCCTAGACGAAGCGGACATGGTGCATAA 1325
BSNT_00121___ 1326 AGTAACGATTGTTCCTCGGGGCCAGGCTGGCGGTTATGCTGTTATGCTGC 1375
|||||||||.||||||||.||.|||||.|||||.|||||.||.|||||.|
BPUM_0053___f 1326 AGTAACGATCGTTCCTCGTGGTCAGGCAGGCGGATATGCGGTCATGCTTC 1375
BSNT_00121___ 1376 CAAGAGAAGACCGTTATTTCCAAACAAAGCCGGAACTGCTTGATAAAATT 1425
|||||||||||||||||||||||||.|||||.||.||.||||||||||||
BPUM_0053___f 1376 CAAGAGAAGACCGTTATTTCCAAACGAAGCCTGAGCTTCTTGATAAAATT 1425
BSNT_00121___ 1426 GTCGGCCTCTTGGGCGGACGTGTTGCTGAAGAGATTATCTTCGGTGAAGT 1475
||||||.|..|.|||||.||||||||.||.||.||||..||.||.|||||
BPUM_0053___f 1426 GTCGGCTTGCTCGGCGGTCGTGTTGCAGAGGAAATTACGTTTGGCGAAGT 1475
BSNT_00121___ 1476 CAGCACAGGGGCGCACAATGACTTCCAGCGTGCGACGAATATTGCAAGAC 1525
.||.|||||.||.||.||.||||||||||||||.||....|||||||||.
BPUM_0053___f 1476 AAGTACAGGCGCTCATAACGACTTCCAGCGTGCAACTGGCATTGCAAGAA 1525
BSNT_00121___ 1526 GAATGGTTACGGAATTCGGTATGTCAGAAAAACTGGGACCGTTGCAATTT 1575
|||||||.||.||.|||||||||||.||.|||||.||.||..|.|||||.
BPUM_0053___f 1526 GAATGGTCACAGAGTTCGGTATGTCTGATAAACTTGGTCCACTACAATTC 1575
BSNT_00121___ 1576 GGACAGTCTCAGGGCGGTCAGGTATTCTTAGGCCGTGATTTCAACAACGA 1625
||.||..|.||.||.|||||.||||||.|.||||||||||||||||||||
BPUM_0053___f 1576 GGTCAAGCACAAGGAGGTCAAGTATTCCTTGGCCGTGATTTCAACAACGA 1625
BSNT_00121___ 1626 ACAGAACTACAGTGATCAAATCGCTTACGAAATTGATCAGGAAATTCAGC 1675
.|.|||.||.|||||....|||||||||||||||||.||.|||.||||||
BPUM_0053___f 1626 GCCGAATTATAGTGAAGCGATCGCTTACGAAATTGACCAAGAAGTTCAGC 1675
BSNT_00121___ 1676 GCATCATCAAAGAATGTTATGAGCGTGCGAAACAAATCCTGACTGAAAAT 1725
|..|||||||.|||.|.||.||.||||||||||||||.||.|||||.|||
BPUM_0053___f 1676 GTTTCATCAAGGAAAGCTACGAACGTGCGAAACAAATTCTCACTGAGAAT 1725
BSNT_00121___ 1726 CGTGACAAGCTTGAATTGATTGCCCAAACGCTTCTGAAAGTTGAAACGCT 1775
...||.|||.|.|||.|.||.||.|||.|.|||||..||||||||||..|
BPUM_0053___f 1726 AAAGATAAGTTAGAAATTATCGCACAAGCTCTTCTAGAAGTTGAAACATT 1775
BSNT_00121___ 1776 TGACGCTGAACAGATCAAA-CACCTTATCGATCATGGAACATTACCTGAG 1824
.||.|||||.||.||.||| |.|.||| |||...|||||...|.||.|||
BPUM_0053___f 1776 AGATGCTGAGCAAATTAAATCTCTTTA-CGAAACTGGAAAGCTTCCAGAG 1824
BSNT_00121___ 1825 CGTAATTTCTCAGATGATGAA---AAGAACGATGATGTGAAAGTAAACAT 1871
|||...|.|.|||||||.||| ||.||.||||||||||||||||||||
BPUM_0053___f 1825 CGTGTATACGCAGATGACGAAGAGAAAAATGATGATGTGAAAGTAAACAT 1874
BSNT_00121___ 1872 TCTGACAAAAACAGAAGAAAAGA--AAGACGATACGAAGGAG---TAA 1914
|||.|| |||||| |||||| ||||| |||
BPUM_0053___f 1875 -----CAAGAA------AAAAGAAGAAGACG------AGGAGATCTAA 1905
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.