Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00120 and BPUM_0052

See Amino acid alignment / Visit BSNT_00120 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:04
# Commandline: needle
#    -asequence dna-align/BSNT_00120___hprT.1.24716.seq
#    -bsequence dna-align/BPUM_0052___hprT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00120___hprT-BPUM_0052___hprT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00120___hprT-BPUM_0052___hprT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00120___hprT
# 2: BPUM_0052___hprT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     427/543 (78.6%)
# Similarity:   427/543 (78.6%)
# Gaps:           3/543 ( 0.6%)
# Score: 1683.0
# 
#
#=======================================

BSNT_00120___      1 ATGATGAAACATGATATCGAGAAAGTACTGATCTCAGAGGAAGAGATACA     50
                        ||||||||.|||||.||.||.||..||||||||||.||||||||.||
BPUM_0052___h      1 ---ATGAAACAAGATATTGAAAAGGTTTTGATCTCAGAAGAAGAGATCCA     47

BSNT_00120___     51 AAAGAAAGTAAAAGAGTTAGGTGCAGAATTAACGAGCGAGTATCAAGATA    100
                     ..|.|||||.||.||..|.||||||..||||||.|||||.|||.|.|.|.
BPUM_0052___h     48 GCAAAAAGTGAAGGAACTGGGTGCAACATTAACCAGCGATTATGATGGTG     97

BSNT_00120___    101 CATTTCCGTTGGCAATCGGTGTGTTAAAAGGAGCACTTCCTTTTATGGCG    150
                     .||||||..||||.||.|||||.||.|||||.||.|||||.||.|||||.
BPUM_0052___h     98 AATTTCCCCTGGCTATTGGTGTTTTGAAAGGGGCTCTTCCATTCATGGCA    147

BSNT_00120___    151 GATCTTATCAAGCATATTGATACATATTTGGAAATGGATTTCATGGATGT    200
                     ||.||.|||||.||.||||||||||||||.|||.|.|||||.||||||||
BPUM_0052___h    148 GACCTGATCAAACACATTGATACATATTTAGAACTTGATTTTATGGATGT    197

BSNT_00120___    201 ATCAAGCTACGGAAATTCTACGGTTTCTTCTGGAGAAGTAAAAATCATTA    250
                     |||.|||||||||||.|||||.||.|||||.|||||||||||.|||||||
BPUM_0052___h    198 ATCTAGCTACGGAAAATCTACCGTATCTTCAGGAGAAGTAAAGATCATTA    247

BSNT_00120___    251 AAGATTTGGATACATCTGTAGAGGGCCGGGACATCTTAATTATTGAAGAT    300
                     |||||.|.|||||.|||||.||.||..|.||.||.||||||||.||||||
BPUM_0052___h    248 AAGATCTAGATACTTCTGTTGAAGGAAGAGATATTTTAATTATGGAAGAT    297

BSNT_00120___    301 ATCATCGACAGTGGGTTAACCTTAAGTTATCTCGTAGAGCTCTTCCGATA    350
                     ||||||||||||||||||||.||.||.|||||.||||||||.||||||||
BPUM_0052___h    298 ATCATCGACAGTGGGTTAACTTTGAGCTATCTGGTAGAGCTTTTCCGATA    347

BSNT_00120___    351 CCGTAAAGCAAAATCAATTAAGATTGTTACCCTTTTGGATAAACCGAGCG    400
                     ||||||||||||.||.||.||.|||||.||..|..|.||||||||.||.|
BPUM_0052___h    348 CCGTAAAGCAAACTCCATAAAAATTGTGACATTGCTTGATAAACCAAGTG    397

BSNT_00120___    401 GAAGAAAAGCGGACATCAAAGCAGACTTTGTCGGTTTTGAAGTTCCTGAC    450
                     |..|.|||||.||||||||||||||.|.|||.||.||||||||.||.||.
BPUM_0052___h    398 GTCGTAAAGCAGACATCAAAGCAGATTATGTTGGATTTGAAGTACCAGAT    447

BSNT_00120___    451 GCGTTTGTAGTGGGTTACGGACTTGATTATGCTGAGCGCTATCGCAATCT    500
                     ||.|||||.||.||.||.|||.|.||||..|||||.||.||.||.||.||
BPUM_0052___h    448 GCATTTGTTGTCGGCTATGGATTGGATTTCGCTGAACGTTACCGAAACCT    497

BSNT_00120___    501 GCCTTATATCGGAGTGTTAAAACCGGCAGTTTATGAAAGCTGA    543
                     .||.|||||.||||||||||||||..|.|||||.||..|||.|
BPUM_0052___h    498 CCCGTATATTGGAGTGTTAAAACCATCTGTTTACGAGGGCTAA    540


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