Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00098 and BPUM_0043
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:03
# Commandline: needle
# -asequence dna-align/BSNT_00098___yabO.1.24716.seq
# -bsequence dna-align/BPUM_0043___yabO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00098___yabO-BPUM_0043___yabO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00098___yabO-BPUM_0043___yabO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00098___yabO
# 2: BPUM_0043___yabO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity: 202/262 (77.1%)
# Similarity: 202/262 (77.1%)
# Gaps: 2/262 ( 0.8%)
# Score: 758.0
#
#
#=======================================
BSNT_00098___ 1 ATGAGATTAGATAAATTTTTGAAGGTATCACGGCTGATCAAACGGCGTAC 50
||||||||||||||||||||.||.||.||.||..|.||.|||.|..|.||
BPUM_0043___y 1 ATGAGATTAGATAAATTTTTAAAAGTGTCCCGTTTAATTAAAAGAAGAAC 50
BSNT_00098___ 51 ACTAGCGAAGGAAGTAGCTGACCAAGGACGAATCTCTATTAACGGAAACC 100
|.|.||.||.|||||.|||||.|||||..||||.|||||||||||.|..|
BPUM_0043___y 51 ATTGGCAAAAGAAGTCGCTGATCAAGGCAGAATTTCTATTAACGGCACAC 100
BSNT_00098___ 101 AAGCTAAAGCTAGCTCTGACGTAAAACCGGGAGATGAACTAACGGTCCGC 150
|.||.|||||.|||||||||||.|||...|||||.||.||.|...||||.
BPUM_0043___y 101 AGGCGAAAGCCAGCTCTGACGTGAAAGAAGGAGACGAGCTTAAAATCCGT 150
BSNT_00098___ 151 TTCGGCCAAAAGCTTGTAACGGTTCAAGTTAATGAATTGAAAGACACGAC 200
||.||.||||||||.||.|||||.|||||.||.||.||.||.|||||.||
BPUM_0043___y 151 TTTGGTCAAAAGCTCGTGACGGTGCAAGTCAACGAGTTAAAGGACACAAC 200
BSNT_00098___ 201 GAAAAAAGAAGAAGCTGCAAACATGTACACGATTCTAAAAGAAGAAAAAC 250
||||||||||||||||||...||||||.||..|.|||||||||||||||
BPUM_0043___y 201 GAAAAAAGAAGAAGCTGCTGGCATGTATACTGTGCTAAAAGAAGAAAAA- 249
BSNT_00098___ 251 TCGGC-GAATAG 261
.|.|| ||||||
BPUM_0043___y 250 ACAGCAGAATAG 261
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