Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00085 and BPUM_0033

See Amino acid alignment / Visit BSNT_00085 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:01
# Commandline: needle
#    -asequence dna-align/BSNT_00085.1.24716.seq
#    -bsequence dna-align/BPUM_0033___spoVG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00085-BPUM_0033___spoVG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00085-BPUM_0033___spoVG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00085
# 2: BPUM_0033___spoVG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     217/298 (72.8%)
# Similarity:   217/298 (72.8%)
# Gaps:          53/298 (17.8%)
# Score: 942.0
# 
#
#=======================================

BSNT_00085         1 ------------------------------------------------AT      2
                                                                     ||
BPUM_0033___s      1 GTGGAAGTTACTGACGTAAGATTACGCCGCGTGAATACCGATGGTCGCAT     50

BSNT_00085         3 GAGAGCGATTGCATCCATCACGCTGGATCACGAATTTGTTGTACATGATA     52
                     |||.|||||||||||||||||||||||.||||||||||||||.|||||||
BPUM_0033___s     51 GAGGGCGATTGCATCCATCACGCTGGACCACGAATTTGTTGTTCATGATA    100

BSNT_00085        53 TTCGTGTGATTGATGGAAACAATGGTCTT-TTCGTTGCGATGCCGAGTAA    101
                     ||||||||||||||||||||||||| ||| ||.|||||.|||||.||.||
BPUM_0033___s    101 TTCGTGTGATTGATGGAAACAATGG-CTTGTTTGTTGCAATGCCTAGCAA    149

BSNT_00085       102 ACGCACCCCTGATGGAGAGTTCCGCGATATTGCTCATCCTATTAATTCAA    151
                     ||||||.||||||||||||||.|||||.|||||.|||||.||||||||||
BPUM_0033___s    150 ACGCACGCCTGATGGAGAGTTTCGCGACATTGCACATCCAATTAATTCAA    199

BSNT_00085       152 GCACGCGAGGAAAGATTCAAGATGCCGTGTTAAATGAGTATCATCGTCTG    201
                     ||||.|||||.||.|||||||||||.||.|||||||||||||||||..|.
BPUM_0033___s    200 GCACTCGAGGTAAAATTCAAGATGCTGTTTTAAATGAGTATCATCGCTTA    249

BSNT_00085       202 GGTGACACTGAAG---CATTAGAATTCGAAGAAGCTGGAGCTTCTTAA    246
                     |||||....||||   ||.|.||||..|||||||||||||||||||||
BPUM_0033___s    250 GGTGAAGAGGAAGAGACAATTGAATATGAAGAAGCTGGAGCTTCTTAA    297


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