Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00084 and BPUM_0032

See Amino acid alignment / Visit BSNT_00084 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:01
# Commandline: needle
#    -asequence dna-align/BSNT_00084___yabJ.1.24716.seq
#    -bsequence dna-align/BPUM_0032___yabJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00084___yabJ-BPUM_0032___yabJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00084___yabJ-BPUM_0032___yabJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00084___yabJ
# 2: BPUM_0032___yabJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity:     286/378 (75.7%)
# Similarity:   286/378 (75.7%)
# Gaps:           0/378 ( 0.0%)
# Score: 1062.0
# 
#
#=======================================

BSNT_00084___      1 ATGACAAAAGCAGTCCACACAAAACATGCGCCAGCGGCAATCGGGCCTTA     50
                     ||||||||||..||.||.||.||||||||.|||||.||.||.||.|||||
BPUM_0032___y      1 ATGACAAAAGTTGTTCAAACCAAACATGCACCAGCAGCCATTGGACCTTA     50

BSNT_00084___     51 TTCACAAGGGATTATCGTCAACAATATGTTTTACAGCTCAGGCCAAATCC    100
                     .||.|||||||||||.|||||.||.||||||||||||||.||.||.||.|
BPUM_0032___y     51 CTCTCAAGGGATTATAGTCAATAACATGTTTTACAGCTCCGGGCAGATTC    100

BSNT_00084___    101 CTTTGACTCCTTCAGGCGAAATGGTGAACGGCGATATTAAGGAGCAGACT    150
                     |.||.||..|..|.||.||..|.||.||.||.||||||||.||.||.|||
BPUM_0032___y    101 CATTAACGGCAGCTGGAGACTTTGTAAATGGAGATATTAAAGAACAAACT    150

BSNT_00084___    151 CATCAAGTATTCAGCAATTTAAAGGCGGTTCTGGAAGAAGCGGGTGCTTC    200
                     ||||||||.|||.|.|||.|.||.||.||.||.||||..||.||||||||
BPUM_0032___y    151 CATCAAGTGTTCCGTAATCTTAATGCCGTACTTGAAGCGGCAGGTGCTTC    200

BSNT_00084___    201 TTTTGAAACAGTTGTAAAAGCAACTGTATTTATCGCGGATATGGAACAGT    250
                     .|||||.|||||.||.|||||.||.||.||||||...|||||||||||.|
BPUM_0032___y    201 CTTTGAGACAGTCGTGAAAGCGACAGTTTTTATCAAAGATATGGAACAAT    250

BSNT_00084___    251 TTGCGGAAGTAAACGAAGTGTACGGACAATACTTTGACACTCACAAACCG    300
                     |.|..||||||||.|||||||||||..|.||.||..|.||.||.||.||.
BPUM_0032___y    251 TCGGAGAAGTAAATGAAGTGTACGGTGAGTATTTCCATACACATAAGCCA    300

BSNT_00084___    301 GCGAGATCTTGTGTTGAAGTCGCGAGACTCCCGAAGGATGCGTTAGTCGA    350
                     ||..|.||||||||.|||||.||.|||||.||.||||||||..|.||.||
BPUM_0032___y    301 GCTCGTTCTTGTGTGGAAGTAGCAAGACTTCCTAAGGATGCACTCGTAGA    350

BSNT_00084___    351 GATTGAAGTTATTGCACTGGTGAAATAA    378
                     .||||||||.||||||.|.||.||.|||
BPUM_0032___y    351 AATTGAAGTGATTGCATTAGTCAAGTAA    378


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