Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00084 and BPUM_0032
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:01
# Commandline: needle
# -asequence dna-align/BSNT_00084___yabJ.1.24716.seq
# -bsequence dna-align/BPUM_0032___yabJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00084___yabJ-BPUM_0032___yabJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00084___yabJ-BPUM_0032___yabJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00084___yabJ
# 2: BPUM_0032___yabJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 286/378 (75.7%)
# Similarity: 286/378 (75.7%)
# Gaps: 0/378 ( 0.0%)
# Score: 1062.0
#
#
#=======================================
BSNT_00084___ 1 ATGACAAAAGCAGTCCACACAAAACATGCGCCAGCGGCAATCGGGCCTTA 50
||||||||||..||.||.||.||||||||.|||||.||.||.||.|||||
BPUM_0032___y 1 ATGACAAAAGTTGTTCAAACCAAACATGCACCAGCAGCCATTGGACCTTA 50
BSNT_00084___ 51 TTCACAAGGGATTATCGTCAACAATATGTTTTACAGCTCAGGCCAAATCC 100
.||.|||||||||||.|||||.||.||||||||||||||.||.||.||.|
BPUM_0032___y 51 CTCTCAAGGGATTATAGTCAATAACATGTTTTACAGCTCCGGGCAGATTC 100
BSNT_00084___ 101 CTTTGACTCCTTCAGGCGAAATGGTGAACGGCGATATTAAGGAGCAGACT 150
|.||.||..|..|.||.||..|.||.||.||.||||||||.||.||.|||
BPUM_0032___y 101 CATTAACGGCAGCTGGAGACTTTGTAAATGGAGATATTAAAGAACAAACT 150
BSNT_00084___ 151 CATCAAGTATTCAGCAATTTAAAGGCGGTTCTGGAAGAAGCGGGTGCTTC 200
||||||||.|||.|.|||.|.||.||.||.||.||||..||.||||||||
BPUM_0032___y 151 CATCAAGTGTTCCGTAATCTTAATGCCGTACTTGAAGCGGCAGGTGCTTC 200
BSNT_00084___ 201 TTTTGAAACAGTTGTAAAAGCAACTGTATTTATCGCGGATATGGAACAGT 250
.|||||.|||||.||.|||||.||.||.||||||...|||||||||||.|
BPUM_0032___y 201 CTTTGAGACAGTCGTGAAAGCGACAGTTTTTATCAAAGATATGGAACAAT 250
BSNT_00084___ 251 TTGCGGAAGTAAACGAAGTGTACGGACAATACTTTGACACTCACAAACCG 300
|.|..||||||||.|||||||||||..|.||.||..|.||.||.||.||.
BPUM_0032___y 251 TCGGAGAAGTAAATGAAGTGTACGGTGAGTATTTCCATACACATAAGCCA 300
BSNT_00084___ 301 GCGAGATCTTGTGTTGAAGTCGCGAGACTCCCGAAGGATGCGTTAGTCGA 350
||..|.||||||||.|||||.||.|||||.||.||||||||..|.||.||
BPUM_0032___y 301 GCTCGTTCTTGTGTGGAAGTAGCAAGACTTCCTAAGGATGCACTCGTAGA 350
BSNT_00084___ 351 GATTGAAGTTATTGCACTGGTGAAATAA 378
.||||||||.||||||.|.||.||.|||
BPUM_0032___y 351 AATTGAAGTGATTGCATTAGTCAAGTAA 378
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