Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00083 and BPUM_0031
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:01
# Commandline: needle
# -asequence dna-align/BSNT_00083___purR.1.24716.seq
# -bsequence dna-align/BPUM_0031___purR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00083___purR-BPUM_0031___purR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00083___purR-BPUM_0031___purR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00083___purR
# 2: BPUM_0031___purR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity: 638/885 (72.1%)
# Similarity: 638/885 (72.1%)
# Gaps: 78/885 ( 8.8%)
# Score: 2325.0
#
#
#=======================================
BSNT_00083___ 1 ATGAAGTTTCGTCGCAGCGGCAGATTGGTGGACTTAACAAATTATTTGTT 50
||||||||||||||.|||||||||||||||||||||||||||||.|||||
BPUM_0031___p 1 ATGAAGTTTCGTCGAAGCGGCAGATTGGTGGACTTAACAAATTACTTGTT 50
BSNT_00083___ 51 AACCCATCCGCACGAGTTAATACCGCTAACCTTTTTCTCTGAGCGGTATG 100
|.||||.|||||||...||.|||||.||||||||||..|.||..|.|||.
BPUM_0031___p 51 AGCCCACCCGCACGTACTAGTACCGTTAACCTTTTTTGCAGAAAGATATC 100
BSNT_00083___ 101 AATCTGCAAAATCATCGATCAGTGAAGATTTAACAATTATTAAACAAACC 150
|||||||.||.||.||.||.||||||||.|||||.|||||.|||||.|||
BPUM_0031___p 101 AATCTGCGAAGTCCTCCATTAGTGAAGACTTAACGATTATCAAACAGACC 150
BSNT_00083___ 151 TTTGAACAGCAGGGGATTGGTACTTTGCTTACTGTTCCCGGAGCTGCCGG 200
||.|||||||||||.||.||.||.|||||||||||.||.||.|||||.||
BPUM_0031___p 151 TTCGAACAGCAGGGAATAGGCACATTGCTTACTGTACCTGGTGCTGCTGG 200
BSNT_00083___ 201 AGGCGTTAAATATATTCCGA----------AAATGAAGCAGGCTGAAGCT 240
.||.||.||||||||||||| |||.|||||||.|
BPUM_0031___p 201 CGGAGTGAAATATATTCCGAAGATTCACCTAAAAGAAGCAGAC------- 243
BSNT_00083___ 241 GAAG-AGTTTGTGCAGACAC----TTGGACAGTCGCTGGCAAATCCTGAG 285
||.| ||| |.|| |.|||.|..|.||..|.|.||||||.
BPUM_0031___p 244 GACGTAGT--------AAACGATATCGGAGAAGCTCTATCGACTCCTGAA 285
BSNT_00083___ 286 CGTATCCTTCCGGGCGGTTATGTATATTTAACGGATATCTTAGGAAAGCC 335
|||.|.|||||.|||||||||.||||||||||.|||.|.|||||.||.||
BPUM_0031___p 286 CGTGTACTTCCTGGCGGTTATTTATATTTAACCGATGTTTTAGGTAATCC 335
BSNT_00083___ 336 ATCTGTACTCTCCAAGGTAGGGAAGCTGTTTGCTTCCGTGTTTGCAGAGC 385
|||..|.||..|.||..|.||.|||||.|||||..||.|.||||||||.|
BPUM_0031___p 336 ATCAATCCTTGCGAAAATCGGTAAGCTATTTGCGACCATCTTTGCAGACC 385
BSNT_00083___ 386 GCGAAATTGATGTTGTCATGACCGTTGCCACGAAAGGCATCCCTCTTGCG 435
|.|..|||||.||.||||||||.|||||.||.||.||.||.||..||||.
BPUM_0031___p 386 GTGCGATTGACGTCGTCATGACTGTTGCGACAAAGGGTATTCCAATTGCC 435
BSNT_00083___ 436 TATGCAGCTGCAAGTTATTTGAATGTACCTGTTGTGATCGTTCGTAAAGA 485
|||.|.|.|||..|||||||.|||||.||.||||||||||||.|.|||||
BPUM_0031___p 436 TATTCTGTTGCGGGTTATTTAAATGTGCCGGTTGTGATCGTTAGAAAAGA 485
BSNT_00083___ 486 CAATAAGGTAACAGAGGGCTCCACAGTCAGCATTAATTACGTTTCAGGCT 535
.|||||.|||||.||.||.||.||.||.||.|||||.||||..|||||.|
BPUM_0031___p 486 TAATAAAGTAACTGAAGGATCAACTGTAAGTATTAACTACGCGTCAGGTT 535
BSNT_00083___ 536 CCTCAAACCGCATTCAAACAATGTCACTTGCGAAAAGAAGCAT-GA-AAA 583
|.||.||.||.||||||||.|||||||||||.||..|.|||.| || |||
BPUM_0031___p 536 CGTCTAATCGAATTCAAACCATGTCACTTGCAAAGCGGAGCTTAGATAAA 585
BSNT_00083___ 584 CGGGGTCAAACGTACTCATTATTGATGACTTTATGAAAGCAGGCGGCACC 633
|||||.||.||.||.||.||||||||||||||||||||.|||||.|||
BPUM_0031___p 586 --GGGTCCAATGTCCTGATCATTGATGACTTTATGAAAGCTGGCGGAACC 633
BSNT_00083___ 634 ATTAATGGTATGATTAATCTGTTGGATGAGTTTAACGCAAATGTGGCGGG 683
|||||.||.|||.|.|||.|..|.||.||.|||||.||||||||.||.||
BPUM_0031___p 634 ATTAACGGCATGGTGAATTTACTTGAGGAATTTAATGCAAATGTTGCAGG 683
BSNT_00083___ 684 AATCGGCG-TCTTAGTT-GAAGCCGAAGGAGTAGATGAACGTCTTGTTGA 731
.|||||.| |||| || ||||.||||||.||||||||||||||.|||||
BPUM_0031___p 684 GATCGGTGTTCTT--TTAGAAGACGAAGGCGTAGATGAACGTCTCGTTGA 731
BSNT_00083___ 732 CGAATATATGTCACTTCTTACTCTTTCAACCATCAACATGAAAGAGAAGT 781
.||||||.|.||.|||.|.|..|||||||||||..|.|||||..|||||.
BPUM_0031___p 732 TGAATATGTATCGCTTTTAAAGCTTTCAACCATTGATATGAAGCAGAAGA 781
BSNT_00083___ 782 CCATTGAAATTCA-GAATGGCAATTTTCTGCG----TTTTCTT---AAAG 823
.||||||.|||.| ||| ||||| ||||..|| |||||.| ||||
BPUM_0031___p 782 TCATTGAGATTAATGAA-GGCAA-TTTCCACGAGTTTTTTCATTCGAAAG 829
BSNT_00083___ 824 ACAATCTTTTAAAGAATGGAGAGACAGAATCATGA 858
.||||
BPUM_0031___p 830 -------CTTAA----------------------- 834
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