Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00072 and BPUM_0022
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:00
# Commandline: needle
# -asequence dna-align/BSNT_00072___metG.1.24716.seq
# -bsequence dna-align/BPUM_0022___metG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00072___metG-BPUM_0022___metG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00072___metG-BPUM_0022___metG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00072___metG
# 2: BPUM_0022___metG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2047
# Identity: 1507/2047 (73.6%)
# Similarity: 1507/2047 (73.6%)
# Gaps: 98/2047 ( 4.8%)
# Score: 5414.0
#
#
#=======================================
BSNT_00072___ 1 ATGCCGCAAGAAAACAATACATTTTACATTACAACACCGATTTATTATCC 50
||||||.||.|.||.||.||.||.||..|.||||||||.|||||.|||||
BPUM_0022___m 1 ATGCCGGAAAAGAAAAAAACGTTCTATCTGACAACACCTATTTACTATCC 50
BSNT_00072___ 51 GAGCGGAAAATTACATATCGGCCATGCATATACGACAGTCGCGGGAGATG 100
||||||||||||||||||.||.|||||.|||||||||||.||.||.||||
BPUM_0022___m 51 GAGCGGAAAATTACATATTGGACATGCTTATACGACAGTAGCAGGGGATG 100
BSNT_00072___ 101 CAATGGCACGTTACAAAAGACTAAAAGGGTTCGATGTTCGCTATTTAACG 150
|.|||||.|||||.|||.|.||..||||.|..|||||....|||||||||
BPUM_0022___m 101 CTATGGCTCGTTATAAACGTCTTCAAGGCTATGATGTGATGTATTTAACG 150
BSNT_00072___ 151 GGAACGGACGAGCATGGACAAAAGATCCAGCAAAAAGCTGAACAGGAAAA 200
||.||.||.|||||.||||||||.||.|||||||||||||||.|..||||
BPUM_0022___m 151 GGTACAGATGAGCACGGACAAAAAATTCAGCAAAAAGCTGAAGAACAAAA 200
BSNT_00072___ 201 CATTACACC--TCAGGAGTATGTGGATCGCGCAGCGGCAGATATTCAAAA 248
|||.||||| || ||||||.|.||||..|..|..|||||.||||||..
BPUM_0022___m 201 CATCACACCGATC--GAGTATTTAGATCCGGTCGTAGCAGACATTCAATC 248
BSNT_00072___ 249 ACTGTGGAAGCAGCTTGAAATCTCAAACGACGACTTTATCCGCACGACAG 298
|||.||||||.|.||.||.||.||.||.||.||.||.|||||.||.||||
BPUM_0022___m 249 ACTATGGAAGAAACTCGACATTTCCAATGATGATTTCATCCGTACAACAG 298
BSNT_00072___ 299 AAAAACGGCATA----AAGTTGTCATTGAAAAAGTGTTTCAAAAGCTTCT 344
|||||.|.|||| || ||||||...||||||||||||||||.||
BPUM_0022___m 299 AAAAAAGACATACGATAA----TCATTGGGCAAGTGTTTCAAAAGCTACT 344
BSNT_00072___ 345 TGATAACGGGGACATCTATCTTGATGAGTATGAAGGCTGGTACAGCATCC 394
||||.|.||.||.||.|||.|.|||.|.|||||||||||||||||.||.|
BPUM_0022___m 345 TGATCAAGGTGATATTTATTTAGATCAATATGAAGGCTGGTACAGTATTC 394
BSNT_00072___ 395 CTGATGAAACGTTCTACACGGAAACTCAGCTCGTTGATATTGAGCGGAAT 444
|.|||||.||.|||||.||||||||.|||||.||.|||.|.||||..|||
BPUM_0022___m 395 CAGATGAGACATTCTATACGGAAACACAGCTTGTGGATGTGGAGCACAAT 444
BSNT_00072___ 445 GAAAAGGGAGAGGTCATCGGCGGAAAAAGCCCTGACAGCGGTCACCCAGT 494
|||||.|||||.||||..||.||.|||||||||||||||||.||.||.||
BPUM_0022___m 445 GAAAAAGGAGAAGTCACTGGTGGGAAAAGCCCTGACAGCGGACATCCTGT 494
BSNT_00072___ 495 TGAATTGATCAAAGAGGAATCTTATTTCTTCCGCATGGGGAAATACGCGG 544
.|||||.||.|||||||||||.|||||||||||.|||.|.||.||.||.|
BPUM_0022___m 495 CGAATTAATTAAAGAGGAATCATATTTCTTCCGTATGAGTAAGTATGCAG 544
BSNT_00072___ 545 ATCGTCTTCTGAAATACTATGAAGAAAACCCGACATTCATTCAGCCAGAA 594
|||||.|.||..|.||.||.|||.|.||.||.||.|||||||||||.|||
BPUM_0022___m 545 ATCGTTTACTAGACTATTACGAAAAGAATCCAACGTTCATTCAGCCTGAA 594
BSNT_00072___ 595 TCACGCAAAAACGAAATGATTAATAACTTTATCAAACCTGGACTTGAGGA 644
|||.|.||.||.|||||||||||||||||.||||||||.||..|.|||||
BPUM_0022___m 595 TCAAGAAAGAATGAAATGATTAATAACTTCATCAAACCAGGTTTAGAGGA 644
BSNT_00072___ 645 TTTGGCAGTATCACGTACCACTTTTGATTGGGGCGTGAAGGTGCCGGAAA 694
||||||.||||||.|.||.||.|||||||||||..|.||.||.||..|.|
BPUM_0022___m 645 TTTGGCTGTATCAAGAACAACCTTTGATTGGGGAATTAAAGTTCCAAACA 694
BSNT_00072___ 695 ATCCAAAGCATGTTGTATATGTTTGGATTGACGCACTATTTAACTATTTA 744
||||||||||.|||.|.||.||.||||||||.||..|.||.|||||||||
BPUM_0022___m 695 ATCCAAAGCACGTTATCTACGTATGGATTGATGCGTTGTTCAACTATTTA 744
BSNT_00072___ 745 ACGGCACTCGGTTATGATACAGAAAATGATGAGCTTTATCAAAAATATTG 794
||.||..|.|||||.|..|||||..|.|||||....|||.||||||||||
BPUM_0022___m 745 ACTGCGATTGGTTACGGAACAGATCAGGATGAAAAATATAAAAAATATTG 794
BSNT_00072___ 795 GCCTGCCGATGTTCATTTAGTCGGTAAGGAGATTGTACGATTCCATACTA 844
||||||..|.||.|||.|.||.||.||.||.|||||.||.||||||||.|
BPUM_0022___m 795 GCCTGCTAACGTGCATCTCGTAGGGAAAGAAATTGTGCGTTTCCATACGA 844
BSNT_00072___ 845 TTTACTGGCCAATTATGCTGATGGCGCTGGATCTTCCGCTGCCAAAGCAA 894
||||.||||||||||||||||||||.||.|||||.|||||||||||.|||
BPUM_0022___m 845 TTTATTGGCCAATTATGCTGATGGCACTCGATCTGCCGCTGCCAAAACAA 894
BSNT_00072___ 895 GTATTCGCGCATGGCTGGCTTTTGATGAAAGACGGAAAAATGTCGAAATC 944
.|||||||.||.||.|||||..||||||||||.||.||.|||||.|||||
BPUM_0022___m 895 ATATTCGCACACGGATGGCTACTGATGAAAGATGGCAAGATGTCTAAATC 944
BSNT_00072___ 945 AAAAGGAAACGTTGTAGATCCGGTTACATTAATTGAGCGCTATGGTTTAG 994
||||||.|||||.||.||||||||.||||||||.||.|||||.|||.|.|
BPUM_0022___m 945 AAAAGGGAACGTAGTCGATCCGGTCACATTAATAGATCGCTACGGTCTTG 994
BSNT_00072___ 995 ACGAGCTTCGCTATTACCTGCTTCGCGAAGTGCCGTTCGGATCTGACGGT 1044
|.|..|||||.|||||.||.|||||.|||||.||.||.||..|.||.|||
BPUM_0022___m 995 ATGCCCTTCGTTATTATCTCCTTCGTGAAGTACCTTTTGGTGCGGATGGT 1044
BSNT_00072___ 1045 GTTTTCACGCCGGAAGGATTTGTTGAGCGAATCAACTATGATTTAGCGAA 1094
||.||.||.||.||||||||.||.||.||..|.||||||||..|.||.||
BPUM_0022___m 1045 GTGTTTACACCAGAAGGATTCGTGGAACGTGTAAACTATGACCTTGCCAA 1094
BSNT_00072___ 1095 TGATTTAGGAAATCTATTGAATCGTACTGTTGCGAT-GATCAATAAGTAT 1143
|||||||||.||..|..|.||.|||||.||.||.|| |.|||| ||.|||
BPUM_0022___m 1095 TGATTTAGGTAACTTGCTTAACCGTACAGTGGCAATGGTTCAA-AAATAT 1143
BSNT_00072___ 1144 TTTGACGG-ACA--AATTGGTTCTTACAAAGGTGCTGTTACGGAATTTGA 1190
|||||||| ||| || ||...||.||.|||.|.||||..||.|||||
BPUM_0022___m 1144 TTTGACGGTACATTAA---GTAGCTATAAGGGTCCAGTTAATGAGTTTGA 1190
BSNT_00072___ 1191 CCAAACGCTCACTTCTGTTGCTGAAGAAACAGTGAAAGCTTATGAGAAAG 1240
..|...|||.|...|.||.||.||..|||||||.|||||.|||||..|||
BPUM_0022___m 1191 TGAGGAGCTTAAAGCAGTAGCAGAGCAAACAGTCAAAGCCTATGAAGAAG 1240
BSNT_00072___ 1241 CAATGGAAAATATGGAGTTCTCGGTAGCACTTTCGACTTTATGG-CAGCT 1289
|.||||||||..|.||.||||||||.||.|||||.|.|.|.||| || .|
BPUM_0022___m 1241 CGATGGAAAACCTTGAATTCTCGGTGGCTCTTTCAAATGTTTGGACA-TT 1289
BSNT_00072___ 1290 CATCAGCCGCACAAACAAATACATTGATGAGACAGCTCCATGGGTGCTTG 1339
.||||||.|.||.||.|||||.||||||.||||||||||.||||||||.|
BPUM_0022___m 1290 AATCAGCAGAACGAATAAATATATTGATCAGACAGCTCCTTGGGTGCTGG 1339
BSNT_00072___ 1340 CGAAAGATCCG--GCAAAA-GAAGAAGAATTGCGATCAGTTATGTATCAT 1386
|.||.|| || .||||| ||| ||||..|||..||.||.|||||||||
BPUM_0022___m 1340 CAAAGGA--CGAATCAAAACGAA-AAGAGCTGCATTCTGTCATGTATCAT 1386
BSNT_00072___ 1387 CTCGCTGAATCATTGCGTATTTCAGCGGTACTGCTTCA-GCCATTCTTAA 1435
.|.||.|||||||||||.||..||||.||.|| |||.| |||.|||.|||
BPUM_0022___m 1387 TTAGCAGAATCATTGCGCATCACAGCAGTGCT-CTTAACGCCTTTCCTAA 1435
BSNT_00072___ 1436 CAAAAACACCTGAAAAAATGTTCGAGCAGCTAGGCATTACTGATGA---- 1481
|.|||||||||||.|||||.|||...|||||.||||||...||.||
BPUM_0022___m 1436 CGAAAACACCTGAGAAAATCTTCTTCCAGCTTGGCATTGAAGAAGAAAAG 1485
BSNT_00072___ 1482 CTCTCTAAAAGCTTGGGACAGCATTACAGCTTTCGGCCAGCTGAAAGATA 1531
|| ||||||| |||||.||||||..|.||||||| || .|||.
BPUM_0022___m 1486 CT---TAAAAGC-TGGGATAGCATTCTATCTTTCGG-----TG--CGATT 1524
BSNT_00072___ 1532 CAAAA-------GTACAAAAAGGCGAGCCGTTGTTCCCTCGTTTAGAGGC 1574
|||.| ||||||||.||.|||||.||||||||.||||||||||.
BPUM_0022___m 1525 CAACAAGCGACGGTACAAAAGGGAGAGCCTTTGTTCCCGCGTTTAGAGGT 1574
BSNT_00072___ 1575 AGAAGAAGAAATTGCTTACATCAAAGGGAAAATGCAAGGTTCGGCACCA- 1623
.|||||||||.|.||.||.||.||||.|||||||||.||....||||||
BPUM_0022___m 1575 TGAAGAAGAAGTAGCATATATTAAAGAGAAAATGCAGGGAAGTGCACCAA 1624
BSNT_00072___ 1624 --GCGAAAGAAGAAACAAGAGA---AGAAGAGCCGCAAGAGGTCGATCGT 1668
|...|||||||.|.||.||| ||||||..|..||
BPUM_0022___m 1625 AGGTAGAAGAAGAGAAAATAGAAATAGAAGAAACAGAA------------ 1662
BSNT_00072___ 1669 TTACCT------------GAAATTACGATTGATCAATTCATGGATGTAGA 1706
|||||| ||||||.|..|||||.|.|||....|.||.||
BPUM_0022___m 1663 TTACCTGAGCTGGGAGAAGAAATTGCTTTTGATGATTTCTCAAAAGTTGA 1712
BSNT_00072___ 1707 GCTTCGCGTAGCTGAGGTCATTGAGGCAGAGCCAGTGAAAAAAGCAGACC 1756
.|||||.||.||..||||..|.||.||||..|||||||||||||||||.|
BPUM_0022___m 1713 TCTTCGAGTCGCACAGGTGCTGGAAGCAGCCCCAGTGAAAAAAGCAGATC 1762
BSNT_00072___ 1757 GTTTATTGAAGCTGCAGCTTGATCTTGGTTTTGAAAAGCGCCAAGTGGTA 1806
||.|.||.|||||||||||||||.||||.|||||||||.|.|||.|.||.
BPUM_0022___m 1763 GTCTCTTAAAGCTGCAGCTTGATTTTGGATTTGAAAAGAGACAAATTGTT 1812
BSNT_00072___ 1807 TCCGGCATTGCGAAGCATTATACGCCTGAAGAGCTTGTTGGAAAAAAACT 1856
||.||.||.||.|||||||||...|||||.|||.|.||.||.||.||.||
BPUM_0022___m 1813 TCAGGGATAGCCAAGCATTATCAACCTGAGGAGTTAGTAGGGAAGAAGCT 1862
BSNT_00072___ 1857 CGTTTGTGTAACAAATCTAAAACCGGTTAAACTCAGAGGAGAGCTTTCTC 1906
|||.||||||.|.|||||.|.|||.||||||||||||||.||..||||.|
BPUM_0022___m 1863 CGTCTGTGTAGCGAATCTCACACCAGTTAAACTCAGAGGGGAAATTTCCC 1912
BSNT_00072___ 1907 AAGGTATGATCCTTGCAGGAGAAGCAGACGGCGT------TTTAAAGGTC 1950
|.||.|||||..|..|.|||| ||||.| || ||.||||.||
BPUM_0022___m 1913 AGGGAATGATTTTAACTGGAG----AGACTG-GTGGGAAATTGAAAGTTC 1957
BSNT_00072___ 1951 GTGTCTA--TCGATCAGTCGTTACCAAAAGGCACAAGAATTAAATAA 1995
.|| | |.|||||.||..||.||||.||.||||.||||..||||
BPUM_0022___m 1958 TTG---AAGTGGATCAATCTCTAGCAAATGGAACAAAAATTTTATAA 2001
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