Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00071 and BPUM_0021

See Amino acid alignment / Visit BSNT_00071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence dna-align/BSNT_00071___abrB.1.24716.seq
#    -bsequence dna-align/BPUM_0021.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00071___abrB-BPUM_0021.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00071___abrB-BPUM_0021.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00071___abrB
# 2: BPUM_0021
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     245/289 (84.8%)
# Similarity:   245/289 (84.8%)
# Gaps:           8/289 ( 2.8%)
# Score: 1058.0
# 
#
#=======================================

BSNT_00071___      1 ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGT     50
                     |||||||||||.||||||||||||||||||||.||||||||.||.||.||
BPUM_0021          1 ATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGT     50

BSNT_00071___     51 TATTCCTATCGAACTGCGTCGTACTCTTGGAATCGCAGAAAAAGATGCTC    100
                     .|||||.||||||||.||.||||||||.||||||||.||||||||.|||.
BPUM_0021         51 GATTCCAATCGAACTTCGCCGTACTCTAGGAATCGCTGAAAAAGACGCTT    100

BSNT_00071___    101 TTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCA    150
                     |.|||||.||||||||||||||||||||.|||||.|||||||||||||||
BPUM_0021        101 TGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCA    150

BSNT_00071___    151 AACATGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACT    200
                     |||||||||||||||||.||.||||||||.||.||.||||||||||||||
BPUM_0021        151 AACATGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACT    200

BSNT_00071___    201 TGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAGCAAATCATCA    250
                     |||....||||||||.||||||||....|||||.||.|||||||||||.|
BPUM_0021        201 TGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGTGCAGAGCAAATCATTA    250

BSNT_00071___    251 GCGAAATCCAAAACCAGCTTCAA----AACCTTAAATAA    285
                     .|||||||||||||||.||||||    ||    ||||||
BPUM_0021        251 ACGAAATCCAAAACCAACTTCAATCACAA----AAATAA    285


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