Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05535 and BL07064

See Amino acid alignment / Visit BSNT_05535 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence dna-align/BSNT_05535.1.5803.seq
#    -bsequence dna-align/BL07064.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05535-BL07064.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05535-BL07064.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05535
# 2: BL07064
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     110/168 (65.5%)
# Similarity:   110/168 (65.5%)
# Gaps:          24/168 (14.3%)
# Score: 414.0
# 
#
#=======================================

BSNT_05535         1 ATGGAAGCTGAAAGGAAAAAAAAGATGAGTGAAAAGAAATTGAATCAAGA     50
                                             |||..|||.|||.||||||||||.||
BL07064            1 ------------------------ATGGATGACAAGGAATTGAATCAGGA     26

BSNT_05535        51 AGAATTTCTGAAAATTTTGATGCATGCACATGAAATTGGTGAGCAGTCAT    100
                     |||||||.|||.||||.|.||||||||..||||..|||||||..|.||..
BL07064           27 AGAATTTTTGAGAATTCTTATGCATGCGTATGACGTTGGTGAAAAATCGA     76

BSNT_05535       101 CTGAGATGACGACGAAGGAAATGCTTGAAAATTTGATTTCTCATATTAAA    150
                     ..||.||.||||||||.|||.|.||||||.||.|.|||..||||||.|||
BL07064           77 AAGACATAACGACGAAAGAACTTCTTGAAGATCTCATTCTTCATATCAAA    126

BSNT_05535       151 AATGGATATGCAACATAA    168
                     |||||||||.|.||.|||
BL07064          127 AATGGATATACGACGTAA    144


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