Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04973 and BL07059

See Amino acid alignment / Visit BSNT_04973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence dna-align/BSNT_04973___sspJ.1.5803.seq
#    -bsequence dna-align/BL07059___sspJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04973___sspJ-BL07059___sspJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04973___sspJ-BL07059___sspJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04973___sspJ
# 2: BL07059___sspJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     106/146 (72.6%)
# Similarity:   106/146 (72.6%)
# Gaps:          10/146 ( 6.8%)
# Score: 357.5
# 
#
#=======================================

BSNT_04973___      1 ATGGG---TTTCTTTAATAAAGATAAAGGAAA-ACGTTCCGAAAAAGAAA     46
                     .||||   ||||||.||||||||||.|||||| |.|    |||||.||..
BL07059___ssp      1 TTGGGTATTTTCTTCAATAAAGATAGAGGAAATAAG----GAAAAGGACC     46

BSNT_04973___     47 AAAACGTAATCCAAGGAGCTCTTGAAGATGCTGGTTCAGCTCTAAAAGAT     96
                     ||||||...|.|..||.||.||||||||.||.||...|||.||.||||..
BL07059___ssp     47 AAAACGCCGTTCGGGGGGCGCTTGAAGACGCAGGACAAGCGCTGAAAGGA     96

BSNT_04973___     97 GATCCGCTTCAAGAAGCTGTGCAA-AAAAAGAAAAATAATCGATAA    141
                     ||.||.||.|||||.||.|| ||| ||||||||||||||.||||||
BL07059___ssp     97 GACCCTCTGCAAGAGGCGGT-CAACAAAAAGAAAAATAACCGATAA    141


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