Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01226 and BL07035
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01226.1.5803.seq
# -bsequence dna-align/BL07035.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01226-BL07035.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01226-BL07035.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01226
# 2: BL07035
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 230/541 (42.5%)
# Similarity: 230/541 (42.5%)
# Gaps: 242/541 (44.7%)
# Score: 438.5
#
#
#=======================================
BSNT_01226 1 ATGTATTATGTTGATCCTTATATGTTTGCGGGGCATTTTTAT------GA 44
||.||| ||
BL07035 1 ------------------------------------TTGTATCCATACGA 14
BSNT_01226 45 GCCTTGGC-CTGCTTTTGAATATGAATACCGATATCCATGGCCTGGCATT 93
.|||| | || |||||| .||| |||| |||.|..|||
BL07035 15 TCCTT--CACT--------ATATGA--TCCG-TATC----GCCAGCAATT 47
BSNT_01226 94 GGCAGCGGTGCTG-TTCCGGGCTCTG----------------GCGGCGGC 126
..|..|||.||.| .||||||..|.| ||.||.||
BL07035 48 TCCGCCGGGGCCGCCTCCGGGAGCAGGAGGACAGCAGCAACAGCAGCTGC 97
BSNT_01226 127 TCCGGCCCTGGCATTGGCGGCGGTGCTGTTCCAGGCTTTGGCGGC--GGC 174
||| ||| ||..||.|..||| .||| |.|| |.|
BL07035 98 TCC--CCC------------CGCCGCCGAGCCA--ATTT--CCGCAAGAC 129
BSNT_01226 175 TCCGGCCCT--GGTATTGGCAGCGGTGCCAGCCCAGGCTTCGGCGGTGCG 222
||||||||| ||||||.|| ||.|| |.|| .|||||
BL07035 130 TCCGGCCCTTCGGTATTTGC--CGTTG--ATCC-------TGGCGG---- 164
BSNT_01226 223 CCGCAGGGACCTCCTCCTTCCCAAATACCAGCGAAACCCCCAAAACCGCA 272
||| ||
BL07035 165 -----------------------AAT----------------------CA 169
BSNT_01226 273 GGGTTCTCAAGGAGCCGTTTTGTTAATTGAACCAATCACCATTCGTCCTT 322
| |||..||| ||||.| ||..|| |.|||.|||
BL07035 170 G-------AAGATGCC----TGTTCA--GATACA-----CGTTCATCC-- 199
BSNT_01226 323 GCCTTTTCCGATTTACCTATGTTTGGTTAACCAATGGCCGCTCATTTTGG 372
|.||.|..||.|||.||...||||||
BL07035 200 ------------------------GCTTGAGAAACGGCAGCCGTTTTTGG 225
BSNT_01226 373 TTTTACCCGATCATCCTTGGCAGAAGATCCGTCGGCGGCTTTTATT--GG 420
||.||||||.|..||.|.|| |||||| ||..||| ||
BL07035 226 TTCTACCCGGTTTTCGTCGG--------CCGTCG-----TTCGATTGCGG 262
BSNT_01226 421 GATTCCTC-----ACGGCG------CCGCTGGGTTTATTTCGCCTTAGAC 459
|.|.||.| .|.||| ||||||||||||.||||...|.|||
BL07035 263 GCTACCGCTGGAGGCCGCGTCAATTCCGCTGGGTTTACTTCGGTATTGAC 312
BSNT_01226 460 ----AC-AAATCACATCGATGTTGTAAGCTGCTCATTTTAA 495
|| |.|||||.|| |.|.||||| ||| .|||
BL07035 313 CTGAACGAGATCACTTC-----TTTCAGCTG-TCA--GTAA 345
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