Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_06174 and BL05393

See Amino acid alignment / Visit BSNT_06174 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence dna-align/BSNT_06174___yyzF.1.5803.seq
#    -bsequence dna-align/BL05393.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06174___yyzF-BL05393.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06174___yyzF-BL05393.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06174___yyzF
# 2: BL05393
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity:     127/171 (74.3%)
# Similarity:   127/171 (74.3%)
# Gaps:          12/171 ( 7.0%)
# Score: 491.5
# 
#
#=======================================

BSNT_06174___      1 ATGAAACAAGCGTATTATTCCTGTGAAGAACACATCGAAACGGTACTGGA     50
                     ||||            |.||.||.|||||.||.||.||||||||..|.||
BL05393            1 ATGA------------AGTCTTGCGAAGAGCATATTGAAACGGTCATTGA     38

BSNT_06174___     51 TATGTACATAGACGACCACGAGCTGCCGCCCGAAATCAGAAAAATCGAAC    100
                     .|||||..|.||.||..|.||..||.|.||.|||||||||||||||||||
BL05393           39 CATGTATGTGGATGAGGAAGAATTGGCCCCGGAAATCAGAAAAATCGAAC     88

BSNT_06174___    101 ATACTAACAGTTTATTCACAGCCTGTGAATTATGTGGGGACCCCGCAGTA    150
                     ||||..|||||||||.||||.||||||||||.||||...|.||.||||||
BL05393           89 ATACACACAGTTTATCCACAACCTGTGAATTGTGTGATAAGCCTGCAGTA    138

BSNT_06174___    151 TATATAGTGGGGAACGAATGA    171
                     |||||||||||||||||||||
BL05393          139 TATATAGTGGGGAACGAATGA    159


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.