Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01355 and BL05380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_01355.1.5803.seq
# -bsequence dna-align/BL05380___yfjD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01355-BL05380___yfjD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01355-BL05380___yfjD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01355
# 2: BL05380___yfjD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 626
# Identity: 358/626 (57.2%)
# Similarity: 358/626 (57.2%)
# Gaps: 151/626 (24.1%)
# Score: 916.0
#
#
#=======================================
BSNT_01355 1 -----------------------ATGATTGAAGTAAAAAGCATGATGTTT 27
|| ||||.||.|||||||..||||..
BL05380___yfj 1 TTGGAACAGGAAAAAAAGCAGACAT--TTGATGTGAAAAGCAGAATGTCC 48
BSNT_01355 28 CTAAGAGCTTGGCTGTTCCTCGCTACAGGG------GG---CGCTTTTAT 68
.|.||||..|||.|.|| |.||||| || ||..||.||
BL05380___yfj 49 TTTAGAGTATGGGTTTT------TGCAGGGACTGCAGGTTTCGGATTGAT 92
BSNT_01355 69 TGCAGGAGTATGGCTGGTGTCTGAAGCTCTTACATTTGAATCTAAGTATG 118
| ||||.||||||..|.|.||||||..|.|.|.|.|||||.||.|||.
BL05380___yfj 93 T---GGAGCATGGCTCTTTTATGAAGCAATAAAACTCGAATCAAAATATT 139
BSNT_01355 119 CCCTGCTTTATTTGGGCGGCGGA--TTAATGGCGATCGTTTATGGATTGA 166
||.||||.||..||||.|..||| || |.|.|.||.|.||.||.||||
BL05380___yfj 140 CCTTGCTGTACGTGGGAGTTGGAACTT--TCGGGGTCATCTACGGTTTGA 187
BSNT_01355 167 TCACATTTTTTATGGCTTTTCCGGCGTTCAC-----AAGCCGGGGAAATG 211
|.||.|||.|.||||.|||||||||.||||| || |||||..
BL05380___yfj 188 TGACCTTTCTAATGGTTTTTCCGGCCTTCACGAAAAAA-----GGAAACA 232
BSNT_01355 212 TCATTTTCA--------GCGTAAAAACAGGGCCTGATGGCGAGATTTTCT 253
||||.|||| |.|..|.||.|.| |||| |||.||||
BL05380___yfj 233 TCATCTTCACCATTATCGAGGGAGAAGACG-------GGCG-GATATTCT 274
BSNT_01355 254 C----TAGAAAGCGCAGCGTGATGTT-TTCTGAGG---TAAAACGGATTT 295
| .|||||.| || |||| ||| .||| |.|||.|..||.
BL05380___yfj 275 CAGGGAAGAAATC------TG-TGTTGTTC-AAGGACATCAAAAGCCTTA 316
BSNT_01355 296 ATATGGGACG--GCATCATTACAGCTTGAAAGGGATCTTTTTTGA-AGAT 342
|.|||| || ||..|..||||||..||||||.|| |||.|||| .|||
BL05380___yfj 317 AAATGG--CGGAGCGCCGCTACAGCCCGAAAGGCAT-TTTCTTGATGGAT 363
BSNT_01355 343 ATTATCATCGAGAAAACAGACGGAAAAGTC---GTTCGCATCCCTACTTG 389
||..|.||.||| |||...||.||.|.| ||.||.||.||.||.|.
BL05380___yfj 364 ATACTGATAGAG---ACACGGGGGAACGGCAGGGTGCGGATTCCGACGTA 410
BSNT_01355 390 GAACATTATCGC--------GAATCCATTGTTTTTTGAAGCGGTGGAACG 431
.||||||.| || ||| ||||.|.|||||||.||.|.
BL05380___yfj 411 CAACATTCT-GCCTGAGCCGGAA-------TTTTATAAAGCGGTCGAGCT 452
BSNT_01355 432 CTATATCCTCCCTCATCTGA---ATGAAGAG---GCGAAAAGCAACTGGA 475
.||.|||||.||..||.||| |.||||.| |||.|| ||||
BL05380___yfj 453 GTACATCCTGCCGTATATGACGGAGGAAGCGCGTGCGGAA------TGGA 496
BSNT_01355 476 TCAGCCAATTTACGGAGATTCAGCGC------AGCGCGTATTTAAAGGAA 519
||.|.||.|||||.|| ||||| || ||.||||||||.|||
BL05380___yfj 497 TCGGTCAGTTTACAGA-----AGCGCAAAGAAAG-GCTTATTTAAATGAA 540
BSNT_01355 520 TTTGAAAATCATCCAAAG--CTTTAA 543
|| |||| |||| .|||||
BL05380___yfj 541 TT------TCAT--AAAGATATTTAA 558
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