Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01772 and BL05379

See Amino acid alignment / Visit BSNT_01772 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_01772___yhjA.1.5803.seq
#    -bsequence dna-align/BL05379___yhjA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01772___yhjA-BL05379___yhjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01772___yhjA-BL05379___yhjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01772___yhjA
# 2: BL05379___yhjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     206/277 (74.4%)
# Similarity:   206/277 (74.4%)
# Gaps:          14/277 ( 5.1%)
# Score: 747.5
# 
#
#=======================================

BSNT_01772___      1 ATGAAAAA---AGCGGTGGCGGTTTTG-CTGTCACTCGGTCTCGTTTTCG     46
                     ||||||||   |||.|.||...||||| |||    .||||||..|..|||
BL05379___yhj      1 ATGAAAAAAATAGCAGCGGGTCTTTTGTCTG----CCGGTCTGATCATCG     46

BSNT_01772___     47 GTTTTTCATACGGAGCTGACCATGTGGCGGAAGCCAAAACAAAGGTGAAG     96
                     |||||||.|..||.||.|.|.|||||||.|||||.|||||.|||||.|||
BL05379___yhj     47 GTTTTTCCTGGGGCGCCGGCGATGTGGCAGAAGCAAAAACGAAGGTAAAG     96

BSNT_01772___     97 GTCTATAAGAACTGCAAGGAGTTAAACAAAGTATACAAAGGCGGAGTGGC    146
                     ...||.||.||||||||.|..||||||||||..||.||||||||.||.||
BL05379___yhj     97 ACGTACAAAAACTGCAAAGCTTTAAACAAAGACTATAAAGGCGGCGTCGC    146

BSNT_01772___    147 CCGCACTTCGAA---GGCGAAAAACAAAGGCGGAAAAACAAAGTACAAGC    193
                     |||   |.||||   ||.|||||||||||||||||||||.||||||||||
BL05379___yhj    147 CCG---TACGAAATCGGTGAAAAACAAAGGCGGAAAAACGAAGTACAAGC    193

BSNT_01772___    194 CTTACGTCTCTAAGGACCTTTATGATGCCAATAAAAACAAAGACCGCGAT    243
                     |.||.||.||.||.|..|||||||||||||||||.||....|||||||||
BL05379___yhj    194 CGTATGTTTCAAAAGCGCTTTATGATGCCAATAAGAAGCTGGACCGCGAT    243

BSNT_01772___    244 AAAGATCTTATCGCCTGTGAACGGTAA    270
                     |||||....||.||||||||.||.|.|
BL05379___yhj    244 AAAGACAAAATTGCCTGTGAGCGCTGA    270


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