Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03508 and BL05377
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03508___ansA.1.5803.seq
# -bsequence dna-align/BL05377___ansA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03508___ansA-BL05377___ansA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03508___ansA-BL05377___ansA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03508___ansA
# 2: BL05377___ansA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1011
# Identity: 728/1011 (72.0%)
# Similarity: 728/1011 (72.0%)
# Gaps: 42/1011 ( 4.2%)
# Score: 2541.0
#
#
#=======================================
BSNT_03508___ 1 ATGAAAAAATTATTGATGTTGACAACTGGGGGAACGATTGCTTCAGTTGA 50
||||||||.|||.||.|||||||.||.||.||.||.||.||||||||.||
BL05377___ans 1 ATGAAAAAGTTACTGCTGTTGACCACCGGCGGGACCATCGCTTCAGTAGA 50
BSNT_03508___ 51 AGGGGAAAATGGGCTGGCTCCCGGAGTCAAGGCTGATGAATTATTAAGTT 100
|||.|||||.||.||||||||.||.||.||.||.||.||..|..|.||.|
BL05377___ans 51 AGGCGAAAACGGACTGGCTCCGGGGGTTAAAGCGGAAGAGCTTCTCAGCT 100
BSNT_03508___ 101 ACGTATCAAAACTTGAT-----AACGATTACACAATGGAAACTCAGTCGC 145
|..||||..| |||| || ||||.||.||.||....||.||..
BL05377___ans 101 ATTTATCTGA---TGATCATTCAA--ATTATACGATAGATTGCCAATCTT 145
BSNT_03508___ 146 TTATGAATATAGACAGCACCAATATGCAGCCTGAATACTGGGTGGAAATA 195
|.|||.||||||||||||||||.||||||||||||.||||||||...||.
BL05377___ans 146 TAATGGATATAGACAGCACCAACATGCAGCCTGAACACTGGGTGATGATG 195
BSNT_03508___ 196 GCGGAAGCCGTTAAGGAAAATTATGATGC--CTATGACGGGTTTGTTATT 243
||.||.||.||..|.|||||||| ..|| |||.|||||.|||||.||.
BL05377___ans 196 GCTGAGGCTGTATATGAAAATTA--CAGCCGCTACGACGGCTTTGTGATC 243
BSNT_03508___ 244 ACTCACGGTACAGATACAATGGCCTATACATCTGCCGCACTATCGTATAT 293
||.|||||.||.|||||.||||||||.||.||.||.||.||.||.||.||
BL05377___ans 244 ACGCACGGAACCGATACGATGGCCTACACCTCAGCGGCGCTTTCATACAT 293
BSNT_03508___ 294 GCTGCAGCATGCCAAAAAGCCGATTGTCATCACCGGATCGCAGATTCCGA 343
|||||||.||....|.|||||..|.|..||.||.||.||.||..||||||
BL05377___ans 294 GCTGCAGAATATTGATAAGCCCGTCGCGATTACGGGTTCCCAAGTTCCGA 343
BSNT_03508___ 344 TCACGTTCCAAAAAACCGATGCTAAAAAAAATATTACAGATGCCATTCGA 393
|.|||||..|.|||||.|||||.|||||||||||.|.||||||..|.||.
BL05377___ans 344 TTACGTTTAAGAAAACGGATGCGAAAAAAAATATAAAAGATGCGGTCCGC 393
BSNT_03508___ 394 TTTGCCTGTGAAGGCGTGGGCGGCGTTTATGTTGTATTTGACGGCAGAGT 443
|||||.||.||.|||.|.|||||.||.|||||.||.|||||||||.|.||
BL05377___ans 394 TTTGCGTGCGACGGCATCGGCGGAGTATATGTCGTCTTTGACGGCCGCGT 443
BSNT_03508___ 444 CATTCAGGGAACGCGTGCGATCAAATTAAGAACGAAAAGCTACGACGCAT 493
||||...||.|||.|.|||||||||||||||||.|||||||||||.||||
BL05377___ans 444 CATTTTAGGCACGAGAGCGATCAAATTAAGAACAAAAAGCTACGATGCAT 493
BSNT_03508___ 494 TTGAAAGCATCAATTACCCATATATCGCTTTTATCAATGAAGACGGGATC 543
||||||||||||||||.||.||.||||||||.||..|.||..|.|..|||
BL05377___ans 494 TTGAAAGCATCAATTATCCTTACATCGCTTTCATTCACGATAAGGAAATC 543
BSNT_03508___ 544 GAATACAACAAAC---------AAGTAACGGAACCTGAGAACGACACCTT 584
||.|||||||||| |||||| ||...|.|.|.||
BL05377___ans 544 GAGTACAACAAACGGGTTCCCGAAGTAA---------AGCCAGGCGCTTT 584
BSNT_03508___ 585 CACAGTTGACACCTCACTATGCACAGATGTATGTCTGCTGAAGCTGCATC 634
.|.|.|.||.|||||..||...||.||.||.||||||.|||||||.||||
BL05377___ans 585 GAAACTCGATACCTCTTTAAATACCGACGTTTGTCTGGTGAAGCTTCATC 634
BSNT_03508___ 635 CAGGCTTAAAGCCCGAAATGTTTGATGCCCTGAAAAG--CATGTACAAAG 682
|.||.|||||.||.||..|.||.|||...||||||.| || ||.||||
BL05377___ans 635 CGGGTTTAAAACCAGAGTTTTTCGATTGTCTGAAAGGTTCA--TATAAAG 682
BSNT_03508___ 683 GAATTGTCATTGAGAGTTATGGCAGCGGAGGGGTGCCGTTTGAAGGCAGA 732
|.|||||.||||||||.||.||.|||||.||..|.||.|||||....|||
BL05377___ans 683 GCATTGTGATTGAGAGCTACGGAAGCGGCGGCATTCCTTTTGAGAAAAGA 732
BSNT_03508___ 733 GACATTTTGTCAAAAGTGAATGAGCTGATCGAAAGCGGCATTGTCGTGGT 782
.|||||||...|||||||||.|||||||||||...|||.||.|||||.|.
BL05377___ans 733 AACATTTTAGAAAAAGTGAACGAGCTGATCGATTCCGGTATGGTCGTAGC 782
BSNT_03508___ 783 CATTACGACTCAATGTCTTGAAGAAGGCGAAGACATGAGCATTTACGAGG 832
.||.|||||.|||||.|||||||||||.||.||.||||||||||||||||
BL05377___ans 783 GATCACGACGCAATGCCTTGAAGAAGGAGAGGATATGAGCATTTACGAGG 832
BSNT_03508___ 833 TTGGCCGCAGAGTCAACCAAGACTTAATTATCCGATCAAGAAATATGAAC 882
|.|||||||..||.|||||.||....||||||||.||.||||||||||||
BL05377___ans 833 TCGGCCGCAAGGTAAACCAGGATGCCATTATCCGCTCGAGAAATATGAAC 882
BSNT_03508___ 883 ACAGAAGCAATTGTGCCAAAATTGATGTGGGCGCTAGGTCAGTCTTCGGA 932
||.|||||.||.||.||.||..||||||||||..||||..| ...||||
BL05377___ans 883 ACTGAAGCGATCGTTCCGAAGCTGATGTGGGCTTTAGGGAA--AAACGGA 930
BSNT_03508___ 933 TCTTC---CTGTCGTCAAGAGAATTATGGAAACGCCGATAGCTGATGACG 979
|..| |||..|||||.|..||.||||||||||||||.||.||.||..
BL05377___ans 931 -CAACAAGCTGAAGTCAAAAAGATCATGGAAACGCCGATTGCAGACGATA 979
BSNT_03508___ 980 TTGTCCTGTAA 990
|..||.|.|||
BL05377___ans 980 TCATCATATAA 990
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