Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03507 and BL05376
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03507___aspA.1.5803.seq
# -bsequence dna-align/BL05376___ansB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03507___aspA-BL05376___ansB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03507___aspA-BL05376___ansB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03507___aspA
# 2: BL05376___ansB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1440
# Identity: 1129/1440 (78.4%)
# Similarity: 1129/1440 (78.4%)
# Gaps: 24/1440 ( 1.7%)
# Score: 4433.0
#
#
#=======================================
BSNT_03507___ 1 ATGTTAAACGGCCAAAAAGA-ATATCGCGTGGAAAAAGACTTCCTTGGGG 49
||| ||| ||..|||.|| |||.||...||||||.||.||.||.||.|
BL05376___ans 1 ATG--AAA--GCTGAAATGACATACCGGACGGAAAAGGATTTTCTCGGAG 46
BSNT_03507___ 50 AAAAACAAATTGAAGCAGATGTTTATTACGGAATTCAGACGCTCCGTGCT 99
|.||..|.|||...||.|||||.||.|||||.||||||||..|.||.||.
BL05376___ans 47 AGAAGAAGATTCCGGCCGATGTCTACTACGGGATTCAGACATTGCGGGCA 96
BSNT_03507___ 100 TCTGAAAATTTCCCGATCACAGGATACAAAATCCATGAGGAAATGATTAA 149
.|.||.||.||||||||.||||||||.||||||||.||.||||||||.||
BL05376___ans 97 GCGGAGAACTTCCCGATTACAGGATATAAAATCCACGAAGAAATGATCAA 146
BSNT_03507___ 150 CGCACTGGCGATTGTGAAAAAAGCTGCGGCTCTTGCCAACATGGACGTGA 199
.||.|||||..|.|||||||||||.|||||.||||||||||||||....|
BL05376___ans 147 GGCGCTGGCAGTGGTGAAAAAAGCGGCGGCGCTTGCCAACATGGAGACAA 196
BSNT_03507___ 200 AACGGCTGTATGAAGGAATTGGCCAAGCTATCGTACAAGCCGCTGACGAG 249
||||.||.|||.||||..||||..|.||.|||||.|||||||||||.|||
BL05376___ans 197 AACGTCTTTATAAAGGCCTTGGAGATGCCATCGTCCAAGCCGCTGATGAG 246
BSNT_03507___ 250 ATTCTGGAAGGCAAGTGGCACGATCAGTTTATCGTCGATCCGATTCAGGG 299
||.||.|||||.|||..||||||||||||.|||||.||||||||.||.||
BL05376___ans 247 ATCCTTGAAGGAAAGCTGCACGATCAGTTCATCGTTGATCCGATCCAAGG 296
BSNT_03507___ 300 CGGTGCCGGAACTTCTATGAACATGAACGCGAATGAGGTTATCGGAAACC 349
|||.||.||.|||||.|||||.|||||||||||.||.||.||||||||||
BL05376___ans 297 CGGCGCAGGCACTTCAATGAATATGAACGCGAACGAAGTCATCGGAAACC 346
BSNT_03507___ 350 GGGCGCTTGAAATCATGGGACATAAAAAGGGAGATTATATCCATTTAAGT 399
|.||.||||||.|..|.||.||.||.||.||.||.|||||.||..|.|||
BL05376___ans 347 GCGCACTTGAACTGCTCGGCCACAACAAAGGCGAATATATTCACCTGAGT 396
BSNT_03507___ 400 CCAAACACACATGTGAACATGTCACAGTCTACGAACGATGTGTTCCCGAC 449
||.||.||.||.||.||||||||.||.||.||.|||||.||.||||||||
BL05376___ans 397 CCGAATACGCACGTCAACATGTCTCAATCGACAAACGACGTATTCCCGAC 446
BSNT_03507___ 450 TGCTATCCATATTTCCACATTGAAGCTCTTAGAAAAACTGCTGAAAACAA 499
.||.||.||||||||.||..|.|||||..|.|||||.||||||.|.||||
BL05376___ans 447 GGCGATTCATATTTCAACGCTTAAGCTGCTGGAAAAGCTGCTGGACACAA 496
BSNT_03507___ 500 TGGAAGATATGCATAGTGTGTTTAAGCAAAAAGCACAGGAGTTTGACTCT 549
|||||.|.||||.|..||..||||||.|||||||||..||.||||||...
BL05376___ans 497 TGGAATACATGCTTGATGCCTTTAAGAAAAAAGCACGCGACTTTGACCAC 546
BSNT_03507___ 550 GTTATTAAAATGGGCCGGACACACCTTCAAGATGCGGTTCCCATCCGTCT 599
||.|||||||||||.||.||.||.||||||||.||.||.||.|||||.||
BL05376___ans 547 GTCATTAAAATGGGGCGCACCCATCTTCAAGACGCCGTGCCGATCCGCCT 596
BSNT_03507___ 600 TGGCCAGGAATTCGAAGCTTACAGCCGTGTTCTCGAGCGTGATATCAAAC 649
|||.|||||.||.|||||.||||||||.||..||||.||.||.|||||||
BL05376___ans 597 TGGACAGGAGTTTGAAGCCTACAGCCGCGTGATCGAACGCGACATCAAAC 646
BSNT_03507___ 650 GAATCAAGCAATCGCGCCAGCACCTATATGAAGTCAACATGGGCGCAACT 699
|.||.||.||||||||||||||..|.|||||||||||.||||||||.||.
BL05376___ans 647 GGATTAAACAATCGCGCCAGCATTTGTATGAAGTCAATATGGGCGCTACC 696
BSNT_03507___ 700 GCTGTTGGTACAGGGCTGAACGCTGATCCTGAATATATCAAACAGGTAGT 749
||.|||||.||.||..|.|||||.|||||....||||||.||.|.||.||
BL05376___ans 697 GCGGTTGGAACGGGATTAAACGCGGATCCGCGCTATATCGAAAATGTCGT 746
BSNT_03507___ 750 AAAGCACCTTGCTGATATTAGCGGGCTTCCTCTTGTCGGCGCTGATCATC 799
.||||||.|.|||||.||.|||||.|||||.||||||||||||||.||||
BL05376___ans 747 CAAGCACTTGGCTGAGATCAGCGGTCTTCCGCTTGTCGGCGCTGACCATC 796
BSNT_03507___ 800 TTGTTGATGCGACACAAAATACAGATGCCTATACAGAGGTATCAGCTTCA 849
|.||.||||||||.||||||||.||.||.||.|||||.||.||||||.||
BL05376___ans 797 TGGTAGATGCGACGCAAAATACGGACGCTTACACAGAAGTTTCAGCTGCA 846
BSNT_03507___ 850 TTAAAAGTCTGCATGATGAACATGTCGAAGATCGCAAACGACCTGCGCTT 899
||||||||.||||||||||||||||||||.|||||.||||||||.||.||
BL05376___ans 847 TTAAAAGTATGCATGATGAACATGTCGAAAATCGCCAACGACCTTCGGTT 896
BSNT_03507___ 900 AATGGCGTCGGGACCGCGCGCCGGACTTGCGGAAATTTCTCTGCCTGCAC 949
.|||||.||.||.||||||||.|||||||||||.|||||.||.||.|||.
BL05376___ans 897 GATGGCATCAGGTCCGCGCGCAGGACTTGCGGAGATTTCCCTTCCGGCAA 946
BSNT_03507___ 950 GTCAGCCGGGCTCATCTATTATGCCGGGGAAAGTCAATCCGGTTATGGCG 999
|.||||||||.|||||.||||||||||||||||||||||||||||||||.
BL05376___ans 947 GACAGCCGGGTTCATCCATTATGCCGGGGAAAGTCAATCCGGTTATGGCC 996
BSNT_03507___ 1000 GAGCTGATCAACCAAATTGCGTTCCAGGTTATCGGAAACGACAATACAAT 1049
|||||||||||||||||.||.||||||||.|||||||||||..||||.||
BL05376___ans 997 GAGCTGATCAACCAAATCGCCTTCCAGGTCATCGGAAACGATCATACGAT 1046
BSNT_03507___ 1050 CTGCCTTGCTTCAGAAGCCGGCCAGCTTGAGTTGAACGTCATGGAGCCCG 1099
||||||||||||.||||||||.|||||.||..||||.||.||||||||.|
BL05376___ans 1047 CTGCCTTGCTTCTGAAGCCGGACAGCTCGAACTGAATGTGATGGAGCCAG 1096
BSNT_03507___ 1100 TGCTTGTCTTTAATTTGCTTCAATCCATCAGCATCATGAACAACGGCTTC 1149
||||.|||||||||.|.||.||||||||||||||||||||||||||.|||
BL05376___ans 1097 TGCTCGTCTTTAATCTCCTGCAATCCATCAGCATCATGAACAACGGATTC 1146
BSNT_03507___ 1150 CGTTCGTTCACTGATCATTGCTTAAAAGGCATCGAAGCCAACGAAAAGCG 1199
|||||||||||||||||.||..||..|||.||.|||||.||.|||||.||
BL05376___ans 1147 CGTTCGTTCACTGATCACTGTGTAGCAGGTATTGAAGCGAATGAAAAACG 1196
BSNT_03507___ 1200 GTT-GAAGCAATATGTAGAAAAAAGCGCTGGAGTGATCACTGCAGTCAAT 1248
.|| .|||| ||||||.|||||.|||||.||.||.||||||||.||||||
BL05376___ans 1197 CTTAAAAGC-ATATGTCGAAAAGAGCGCCGGCGTCATCACTGCGGTCAAT 1245
BSNT_03507___ 1249 CCGCATCTTGGGTATGAAGCGGCAGCTAGAATTGCCAGGGAAGCAATTAT 1298
|||||||||||.||.|||||.||.||.||.|||||.||.|||||.|||.|
BL05376___ans 1246 CCGCATCTTGGCTACGAAGCAGCTGCAAGGATTGCGAGAGAAGCCATTTT 1295
BSNT_03507___ 1299 GACAGGGCAATCTGTCCGGGATCTTTGTCTGCAGCATGATGTGCTGACTG 1348
.|||||.|||||.|||||.|||||.|||||.||..|.||||||.||||.|
BL05376___ans 1296 AACAGGCCAATCCGTCCGCGATCTCTGTCTTCAAAACGATGTGTTGACAG 1345
BSNT_03507___ 1349 AAGAAGAATTGGATATTATTTTAAACCCATATGAGATGACCAAACCAGGT 1398
|||||||..|.|||.|.|||||.||.||.|||||.|||||.|||||.||.
BL05376___ans 1346 AAGAAGAGCTTGATCTGATTTTGAATCCTTATGAAATGACAAAACCGGGG 1395
BSNT_03507___ 1399 ATCGCAGGGAAAGAACTATTAGAAAAATAA---------- 1428
||.||.|||...|||||.||| ||
BL05376___ans 1396 ATTGCCGGGGCTGAACTTTTA-------AATCGGGATTGA 1428
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