Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05919 and BL05374
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence dna-align/BSNT_05919___yxlD.1.5803.seq
# -bsequence dna-align/BL05374___yxlD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05919___yxlD-BL05374___yxlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05919___yxlD-BL05374___yxlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05919___yxlD
# 2: BL05374___yxlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 146/229 (63.8%)
# Similarity: 146/229 (63.8%)
# Gaps: 41/229 (17.9%)
# Score: 418.0
#
#
#=======================================
BSNT_05919___ 1 ATGACACAAACAGAAATCGTCATAACGGTTGCGGCT---------TATCT 41
|||||.|| .|||| |||.|.|||.||| .||.|
BL05374___yxl 1 ATGACTCA---GGAAA-------AACTGCTGCTGCTGCTGCTTTGCATTT 40
BSNT_05919___ 42 CATCG----TATTGGCGCAGGGAATCTTTTTATTTATTGATGCGAA-AAA 86
||.|| ||||.||||||.|.||||||.|||||.||.||||||| |||
BL05374___yxl 41 CACCGCTTTTATTTGCGCAGAGTATCTTTCTATTTCTTAATGCGAAGAAA 90
BSNT_05919___ 87 ACGAAATCGCATGGCATGGATTTGGGGAAT-TGTCGGAC-TGATTACAGC 134
|.|..|.| ||..||.|||.|.|||||||| || ||.| ||||...|.|
BL05374___yxl 91 AAGGGAGC-CAATGCGTGGTTCTGGGGAATATG--GGGCTTGATCCAAAC 137
BSNT_05919___ 135 ACCGATGCCTCTGATT-TGTTATTACTTTTTTGTCATTAGGCCGGATCGG 183
|||||||||| |.||| |..|||||.||.|||||..|.||||||..||..
BL05374___yxl 138 ACCGATGCCT-TTATTATTCTATTATTTATTTGTTGTAAGGCCGTTTCAT 186
BSNT_05919___ 184 AAGAAAAGGGGG-----ATCAAGCAATGA 207
||.||||||.|| ||| ||||
BL05374___yxl 187 AAAAAAAGGAGGCCGTTATC-----ATGA 210
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