Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05909 and BL05369
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence dna-align/BSNT_05909___yxlJ.1.5803.seq
# -bsequence dna-align/BL05369___yxlJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05909___yxlJ-BL05369___yxlJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05909___yxlJ-BL05369___yxlJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05909___yxlJ
# 2: BL05369___yxlJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 424/614 (69.1%)
# Similarity: 424/614 (69.1%)
# Gaps: 46/614 ( 7.5%)
# Score: 1403.5
#
#
#=======================================
BSNT_05909___ 1 GTGACGAGAGAAAAAAATCC-GCT-----GCCCATCACG------TTTTA 38
|..||||| ||| .||..||.|| |||||
BL05369___yxl 1 ------------ATGAATCCAGCTCACGAACCTCTCCCGCTCGAATTTTA 38
BSNT_05909___ 39 TCAAAAAACC-GCTCTTGAGCTTGCCCCATCGCTTCTGGGCTGCCTTCTT 87
|||.||.|| .|..||||.||||||...||.||..|||||||.|||||.
BL05369___yxl 39 -CAACAAGCCAACAATTGAACTTGCCAGGTCCCTGTTGGGCTGTCTTCTC 87
BSNT_05909___ 88 GTAAAAGAAACAGACGAAGGCACAGCGTCAGGCTATATTGTGGAAACAGA 137
||.||||||||.||.|||||..|.||.|||||.|||||||||||.|||||
BL05369___yxl 88 GTTAAAGAAACGGAAGAAGGGCCTGCTTCAGGATATATTGTGGAGACAGA 137
BSNT_05909___ 138 GGCCTATATGGGGGCTGGAGACAGAGCGGCACACAGCTTTAACAACCGCC 187
|||.||||..|||.|.||.||||||||.||.|||||||.|..||||||||
BL05369___yxl 138 GGCTTATAAAGGGCCAGGGGACAGAGCAGCTCACAGCTATGGCAACCGCC 187
BSNT_05909___ 188 GGACGAAGCGGACTGAGATCATGTTTGCAGAAGCTGGGCG-GGTATATAC 236
||||.|||||.||.||.|||||||.|...||||| .|||| |||.|||||
BL05369___yxl 188 GGACAAAGCGCACCGAAATCATGTATCGTGAAGC-CGGCGTGGTGTATAC 236
BSNT_05909___ 237 ATATGTGATGCACACCCATACATTGCTGAATGTCGTTGCCGCGGAAGAG- 285
.||....|||||.|||||.|||.|..|.|||||.|| ..|||||.|||
BL05369___yxl 237 GTACACCATGCATACCCACACACTCATCAATGTTGT--AAGCGGAGGAGC 284
BSNT_05909___ 286 -GATGTCCCGCAAGCGGTATTAATCAGGGCGATTGAGCCGCATGAAGGCC 334
||||..||..|.||.||..|.|||||.|||.||||.||.||||||||||
BL05369___yxl 285 CGATGAACCTGAGGCCGTGCTGATCAGAGCGCTTGAACCTCATGAAGGCC 334
BSNT_05909___ 335 ---AGCTGTTAATGGAGGAGAGAAGGCCGGGCAGGAGTCCGAGGGAATGG 381
.|||| ||||||.||.|||||...||.|.||..|||.|.||.|||
BL05369___yxl 335 TCGCGCTG---ATGGAGAAGCGAAGGAGCGGAAAGAAACCGCGCGATTGG 381
BSNT_05909___ 382 ACAAATGGACCCGGAAAGCTGACAAAAGCGCTTGGCGTCACGATGAATGA 431
|||||.||.||.||||||||||||||.||||||..|.||||||||||.||
BL05369___yxl 382 ACAAACGGTCCGGGAAAGCTGACAAAGGCGCTTTCCATCACGATGAACGA 431
BSNT_05909___ 432 CTACGG----ACGCTGGATCACGGAACAGCCGCTTTACATCGAAAGCGGG 477
.||||| .||||| ||||..|.|||||||||.||||.||..|||
BL05369___yxl 432 TTACGGCAGACCGCTG----ACGGGGCCGCCGCTTTATATCGCAAAAGGG 477
BSNT_05909___ 478 TACACACCGGAAGCAATTTCAACCGGCCCGCGCATCGGCATTGACAACAG 527
||...|||..|||..||||..|.|||.|||||.||.||||||||||||..
BL05369___yxl 478 TATGAACCCCAAGATATTTTGAGCGGTCCGCGAATTGGCATTGACAACTC 527
BSNT_05909___ 528 CGGGGAGGCACGCGATTATCCATGGCGTTTCTGGGTGACGGGAAACAGGT 577
.||.||.||..|.||.||.||.|||||.||||||.|.|..||.|||.|.|
BL05369___yxl 528 AGGTGAAGCGAGGGAATACCCTTGGCGATTCTGGATAAAAGGGAACCGCT 577
BSNT_05909___ 578 ATGTGTCGCGTTAG 591
||||.||..|.|||
BL05369___yxl 578 ATGTCTCAAGATAG 591
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