Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05890 and BL05367

See Amino acid alignment / Visit BSNT_05890 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence dna-align/BSNT_05890.1.5803.seq
#    -bsequence dna-align/BL05367.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05890-BL05367.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05890-BL05367.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05890
# 2: BL05367
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     107/157 (68.2%)
# Similarity:   107/157 (68.2%)
# Gaps:          14/157 ( 8.9%)
# Score: 317.5
# 
#
#=======================================

BSNT_05890         1 ATGCTGCAATTAA--TGAAACAGCTGTATGAAAAACCCGCTGTCAAGTGG     48
                     |||.|  ||.|||  |.|.|..|.|||||||||||.|..|..|.||||||
BL05367            1 ATGTT--AAATAAGCTAAGAATGTTGTATGAAAAAACAACAATGAAGTGG     48

BSNT_05890        49 ACATG-TCATACAGGCTT----TTATTTGATGATACTGCTTGTTTTGTTT     93
                       .|| ||| |||  |||    |||.||..|.||.|||.|..|..|||||
BL05367           49 --CTGCTCA-ACA--CTTCCTATTACTTTCTCATTCTGGTGCTGCTGTTT     93

BSNT_05890        94 TTTATGTATGGTTTTCACACCGCGAATACCGGTTCATATATTTATAACGA    143
                     ||.||.||.||.||.||.||.||.|||||.|||||||||||||||||.||
BL05367           94 TTAATTTACGGATTCCATACAGCAAATACAGGTTCATATATTTATAATGA    143

BSNT_05890       144 TTTCTAA    150
                     .||.|||
BL05367          144 CTTTTAA    150


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