Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05890 and BL05367
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence dna-align/BSNT_05890.1.5803.seq
# -bsequence dna-align/BL05367.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05890-BL05367.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05890-BL05367.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05890
# 2: BL05367
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity: 107/157 (68.2%)
# Similarity: 107/157 (68.2%)
# Gaps: 14/157 ( 8.9%)
# Score: 317.5
#
#
#=======================================
BSNT_05890 1 ATGCTGCAATTAA--TGAAACAGCTGTATGAAAAACCCGCTGTCAAGTGG 48
|||.| ||.||| |.|.|..|.|||||||||||.|..|..|.||||||
BL05367 1 ATGTT--AAATAAGCTAAGAATGTTGTATGAAAAAACAACAATGAAGTGG 48
BSNT_05890 49 ACATG-TCATACAGGCTT----TTATTTGATGATACTGCTTGTTTTGTTT 93
.|| ||| ||| ||| |||.||..|.||.|||.|..|..|||||
BL05367 49 --CTGCTCA-ACA--CTTCCTATTACTTTCTCATTCTGGTGCTGCTGTTT 93
BSNT_05890 94 TTTATGTATGGTTTTCACACCGCGAATACCGGTTCATATATTTATAACGA 143
||.||.||.||.||.||.||.||.|||||.|||||||||||||||||.||
BL05367 94 TTAATTTACGGATTCCATACAGCAAATACAGGTTCATATATTTATAATGA 143
BSNT_05890 144 TTTCTAA 150
.||.|||
BL05367 144 CTTTTAA 150
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