Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01077 and BL05325
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_01077___ydjO.1.5803.seq
# -bsequence dna-align/BL05325___ydjO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01077___ydjO-BL05325___ydjO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01077___ydjO-BL05325___ydjO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01077___ydjO
# 2: BL05325___ydjO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 150/239 (62.8%)
# Similarity: 150/239 (62.8%)
# Gaps: 43/239 (18.0%)
# Score: 461.5
#
#
#=======================================
BSNT_01077___ 1 ATGTCTTACTATAACAAACGAAATCAAGAACCGCTGCCAAAAGAAGATGT 50
|||||||||||.|||||.||.||||||||.||.||||||||.||||||.|
BL05325___ydj 1 ATGTCTTACTACAACAATCGCAATCAAGAGCCTCTGCCAAAGGAAGATAT 50
BSNT_01077___ 51 GAGTACTTGGGAATGCACAAAAGAAGACTGTAATGGCTGGACCCGAAAAA 100
.|||||.||||||||.||....||.|||||.||.||.||||...||||||
BL05325___ydj 51 CAGTACGTGGGAATGTACGGCTGAGGACTGCAACGGATGGATGAGAAAAA 100
BSNT_01077___ 101 ACTTCGCCAGCAGTGATACGCCATTGTGCCCTTTATGC-------GGAAG 143
|.|||.|.|||||.|| || ||||||||||| |.||.
BL05325___ydj 101 ATTTCACGAGCAGCGA----CC-----GCCCTTTATGCCCTCTGTGCAAC 141
BSNT_01077___ 144 TA--AAATGGTCGACGGCATCCG-TTCATTA-GTGAATCTCCAA-AACAA 188
.| |||||.|...|||.|.||| |..||.| .|..|||.|||| ||||.
BL05325___ydj 142 AAGGAAATGATAAGCGGAAGCCGCTATATCACCTCTATCACCAACAACAC 191
BSNT_01077___ 189 CAGCCA----------------AACGA-AAACAAGCTAG 210
.|||.| |||.| |||.||
BL05325___ydj 192 GAGCAATCTGAATCGCATCTTTAACCAGAAATAA----- 225
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