Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04677 and BL05321
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04677___yueG.1.5803.seq
# -bsequence dna-align/BL05321___yueG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04677___yueG-BL05321___yueG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04677___yueG-BL05321___yueG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04677___yueG
# 2: BL05321___yueG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity: 149/248 (60.1%)
# Similarity: 149/248 (60.1%)
# Gaps: 52/248 (21.0%)
# Score: 398.0
#
#
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BSNT_04677___ 1 ATGCCTGCAATTGTGGGGCCGATTTATATCATGTCAGTTACGGGTAATG- 49
|||||.||||||||.||.|||||||.|||||.|..||| .|.|.|||
BL05321___yue 1 ATGCCGGCAATTGTCGGACCGATTTTTATCAGGCGAGT---CGTTGATGA 47
BSNT_04677___ 50 CCGCGGCAAGC----TTTGGAGACATATTTGCGATTTCGCCCAAAAGCGT 95
|.||| .||| ||||||||..|.|||||||||||.||.|| ||
BL05321___yue 48 CAGCG--CAGCCTTTTTTGGAGATGTGTTTGCGATTTCCCCGAA----GT 91
BSNT_04677___ 96 CGCTC--ATTC---------AGGGGCGGGGTCAGGCGCATTTCAGCTTGG 134
||.| |||| |||.||| |||.|||||||....||
BL05321___yue 92 -GCACGGATTCCTCCGGAGGAGGAGCG------GGCACATTTCAAACAGG 134
BSNT_04677___ 135 TGATT-----TTGTGAAGATTAACAACCAAACGAGTAAAACTCTCTTCGA 179
.||.| || ||||.|.|||.|.|..|.||||||...||||..
BL05321___yue 135 GGACTACGGATT-----GATTCATAACGATATCAATAAAACGACCTTCAC 179
BSNT_04677___ 180 AGATGCCGATATCACTGATGAAACAGTT-----TCGTTTAACGGGTAA 222
||||||.||| .||||| .||.||| ||.||.|||..||.|
BL05321___yue 180 AGATGCGGAT----GTGATG-GACGGTTCCCAGTCATTGAACCTGTGA 222
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