Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04669 and BL05320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04669___yuzC.1.5803.seq
# -bsequence dna-align/BL05320___yuzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04669___yuzC-BL05320___yuzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04669___yuzC-BL05320___yuzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04669___yuzC
# 2: BL05320___yuzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 205/435 (47.1%)
# Similarity: 205/435 (47.1%)
# Gaps: 162/435 (37.2%)
# Score: 398.0
#
#
#=======================================
BSNT_04669___ 1 ATGAGATATCGTTATCC------CTGGTTTTACGTGTATCCGTATGAGGT 44
|.|.| ||| .||.||||...||.||||.|||.|
BL05320___yuz 1 --------TTGCT-TCCTCCTCATTGCTTTTGGATGCATCCATATCA--- 38
BSNT_04669___ 45 ACGCCGTCCGCCCGCTCCTGCCAACAATATTGATACCTTTATCC----GT 90
|| .||||.| ||||| |..|..|.||||| ||
BL05320___yuz 39 AC-ACGTCAG-------CTGCC---------GGCAGGTCTATCCCGAAGT 71
BSNT_04669___ 91 TCAGCGAGGCAG-GCCGCAGGGATATTTGCG----------GATGC--CC 127
||| ||.||| ||| |..||||| ||.|| ..
BL05320___yuz 72 TCA---AGTCAGCGCC-------TTATTGCGCTCGGCAAAAGAAGCGGAG 111
BSNT_04669___ 128 AGCTCGTT--CT--CGGCC---GCATT----GCGGGCTCGCGGGAGCTCT 166
||||.|.| || |||.| |.||| ||.||||..| ||| ||
BL05320___yuz 112 AGCTTGATGGCTGACGGACAGAGAATTTTAAGCAGGCTTTC---AGC-CT 157
BSNT_04669___ 167 CGCG----------CCGC--ATTCTGACCGCAGCC--GAGCAGTCCGATA 202
|||| |.|| ||..||||.||.||| .|||| .||.|.|
BL05320___yuz 158 CGCGTACTTTGGCCCAGCAAATCATGACGGCTGCCCAAAGCA-ACCAAAA 206
BSNT_04669___ 203 AACAAA--------CCATCAAGCGCCTGATCAAACAAATGGGTGTCCG-- 242
||..|| || |||| |||..||||..||.|||||
BL05320___yuz 207 AAATAACGTGCTGGCC-----GCGC----TCAGGCAAACCGGCGTCCGCA 247
BSNT_04669___ 243 ----GCATGAAGTG---GATACGGTCTTTAATCCCGACGGCATCTATATC 285
||.||| || .||.|| |||||||||||||....|||
BL05320___yuz 248 GCCAGCTTGA--TGCCTCATTCG-------ATCCCGACGGCATTCGCATC 288
BSNT_04669___ 286 AGCCTTATCGGAACGCAAAGCCGAATCATTCTTGCT-TTGCGGTGGTCAG 334
|..||.|||.|..|.|..|||.||.| ||||.|||| |||||.|||||..
BL05320___yuz 289 ATGCTCATCAGCCCCCGCAGCAGACT-ATTCCTGCTATTGCGTTGGTCTT 337
BSNT_04669___ 335 AGGACCGCAATCATTTTGCGTCCATAAGATTATGA 369
||
BL05320___yuz 338 AG--------------------------------- 339
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