Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03471 and BL05312

See Amino acid alignment / Visit BSNT_03471 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence dna-align/BSNT_03471.1.5803.seq
#    -bsequence dna-align/BL05312.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03471-BL05312.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03471-BL05312.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03471
# 2: BL05312
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity:     160/210 (76.2%)
# Similarity:   160/210 (76.2%)
# Gaps:           3/210 ( 1.4%)
# Score: 601.0
# 
#
#=======================================

BSNT_03471         1 ATG---GACAACAAAGGCTGTAGAAAATGCGGCAGTACTGAAGCCGGACA     47
                     |||   ||..|.|||||.||||..||.|||||.||.||.||.||.||.||
BL05312            1 ATGCGTGAACATAAAGGATGTATCAAGTGCGGAAGCACAGATGCGGGGCA     50

BSNT_03471        48 AAAAGAAATAGCCACAACCGGCACGGGATTATCAAAGCTGTTTGACGTGC     97
                     |||||||||.||.||.||||||||.||..|.|||||..||||.||.||||
BL05312           51 AAAAGAAATCGCGACGACCGGCACCGGCCTGTCAAAATTGTTCGATGTGC    100

BSNT_03471        98 AGCATAACCGATTTCTAGTGGTTTACTGTAAGAACTGCGGATATTCAGAG    147
                     ||||||||||.|||||.||.|||||.||.||.||||||||.|||||||||
BL05312          101 AGCATAACCGTTTTCTCGTCGTTTATTGCAAAAACTGCGGGTATTCAGAG    150

BSNT_03471       148 TTTTATAATAAAGAGTCTTCAACTGCCGGGAATATATTGGATTTATTTTT    197
                     .|.||.||||||.|.||||||||.|||||.||.||..|.||..|.||.||
BL05312          151 CTGTACAATAAACAATCTTCAACCGCCGGAAACATTCTCGACCTGTTCTT    200

BSNT_03471       198 TGGAGGCTGA    207
                     ||||||.|||
BL05312          201 TGGAGGATGA    210


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