Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03471 and BL05312
See
Amino acid alignment /
Visit
BSNT_03471 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence dna-align/BSNT_03471.1.5803.seq
# -bsequence dna-align/BL05312.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03471-BL05312.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03471-BL05312.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03471
# 2: BL05312
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 160/210 (76.2%)
# Similarity: 160/210 (76.2%)
# Gaps: 3/210 ( 1.4%)
# Score: 601.0
#
#
#=======================================
BSNT_03471 1 ATG---GACAACAAAGGCTGTAGAAAATGCGGCAGTACTGAAGCCGGACA 47
||| ||..|.|||||.||||..||.|||||.||.||.||.||.||.||
BL05312 1 ATGCGTGAACATAAAGGATGTATCAAGTGCGGAAGCACAGATGCGGGGCA 50
BSNT_03471 48 AAAAGAAATAGCCACAACCGGCACGGGATTATCAAAGCTGTTTGACGTGC 97
|||||||||.||.||.||||||||.||..|.|||||..||||.||.||||
BL05312 51 AAAAGAAATCGCGACGACCGGCACCGGCCTGTCAAAATTGTTCGATGTGC 100
BSNT_03471 98 AGCATAACCGATTTCTAGTGGTTTACTGTAAGAACTGCGGATATTCAGAG 147
||||||||||.|||||.||.|||||.||.||.||||||||.|||||||||
BL05312 101 AGCATAACCGTTTTCTCGTCGTTTATTGCAAAAACTGCGGGTATTCAGAG 150
BSNT_03471 148 TTTTATAATAAAGAGTCTTCAACTGCCGGGAATATATTGGATTTATTTTT 197
.|.||.||||||.|.||||||||.|||||.||.||..|.||..|.||.||
BL05312 151 CTGTACAATAAACAATCTTCAACCGCCGGAAACATTCTCGACCTGTTCTT 200
BSNT_03471 198 TGGAGGCTGA 207
||||||.|||
BL05312 201 TGGAGGATGA 210
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.