Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04465 and BL05306
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04465___luxS.1.5803.seq
# -bsequence dna-align/BL05306___luxS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04465___luxS-BL05306___luxS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04465___luxS-BL05306___luxS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04465___luxS
# 2: BL05306___luxS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 373/474 (78.7%)
# Similarity: 373/474 (78.7%)
# Gaps: 0/474 ( 0.0%)
# Score: 1461.0
#
#
#=======================================
BSNT_04465___ 1 ATGCCTTCAGTAGAAAGTTTTGAGCTTGATCATAATGCGGTTGTTGCTCC 50
|||||||||||.|||||||||||||||||.|||||||||||....||.||
BL05306___lux 1 ATGCCTTCAGTTGAAAGTTTTGAGCTTGACCATAATGCGGTAAAAGCGCC 50
BSNT_04465___ 51 ATATGTAAGACATTGCGGCGTGCATAAAGTGGGAACAGACGGCGTTGTAA 100
.|||||.|||||.||||||||.||.|||||||||||.||||||||.||.|
BL05306___lux 51 TTATGTCAGACACTGCGGCGTCCACAAAGTGGGAACGGACGGCGTCGTCA 100
BSNT_04465___ 101 ATAAATTTGACATTCGTTTTTGCCAGCCAAATAAACAGGCGATGAAGCCT 150
|.||.||||||||.||||||||||||||.|||||||||||.|||||.|||
BL05306___lux 101 ACAAGTTTGACATCCGTTTTTGCCAGCCGAATAAACAGGCAATGAAACCT 150
BSNT_04465___ 151 GACACCATTCACACACTCGAGCATTTGCTCGCGTTTACGATTCGTTCTCA 200
||.||.|||||.||..|.|||||..|.||.||.|||||.||.||..|..|
BL05306___lux 151 GATACGATTCATACTTTGGAGCACCTTCTTGCATTTACAATCCGCACATA 200
BSNT_04465___ 201 TGCTGAGAAATACGATCATTTTGATATCATTGATATTTCTCCAATGGGCT 250
|||.||.|||||.||.||.||||||||.||.||.|||||.||.|||||||
BL05306___lux 201 TGCGGAAAAATATGACCACTTTGATATTATCGACATTTCGCCGATGGGCT 250
BSNT_04465___ 251 GCCAGACAGGCTATTATCTAGTTGTGAGCGGAGAGCCGACATCAGCGGAA 300
||||.||.||||||||.||.||.||.|||||.|||||||.|...|..|||
BL05306___lux 251 GCCAAACGGGCTATTACCTGGTGGTAAGCGGTGAGCCGAAAGTGGAAGAA 300
BSNT_04465___ 301 ATCGTTGATCTGCTTGAAGACACAATGAAGGAAGCGGTAGAGATTACAGA 350
|||||||||.|||||||.||.||..|.||.|||||.||.||..|.||.||
BL05306___lux 301 ATCGTTGATTTGCTTGAGGATACGTTCAAAGAAGCCGTTGAAGTGACTGA 350
BSNT_04465___ 351 AATACCAGCTGCGAATGAAAAGCAGTGCGGCCAAGCGAAGCTTCATGATC 400
|||.||.||.||.||.|||||.|||||||||||.||.||||||||.||||
BL05306___lux 351 AATTCCGGCGGCTAACGAAAAACAGTGCGGCCAGGCAAAGCTTCACGATC 400
BSNT_04465___ 401 TGGAAGGTGCTAAACGTTTAATGCGTTTCTGGCTTTCACAGGATAAAGAA 450
|.|||||.||.||.||..|.||||||||.||||||||.||..||||||||
BL05306___lux 401 TTGAAGGCGCAAAGCGCATGATGCGTTTTTGGCTTTCGCAAAATAAAGAA 450
BSNT_04465___ 451 GAATTGTTAAAAGTATTTGGCTAA 474
||..||.|.||.||.|||||.|||
BL05306___lux 451 GACCTGCTCAAGGTGTTTGGGTAA 474
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