Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02073 and BL05291

See Amino acid alignment / Visit BSNT_02073 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence dna-align/BSNT_02073.1.5803.seq
#    -bsequence dna-align/BL05291.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02073-BL05291.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02073-BL05291.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02073
# 2: BL05291
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity:     144/192 (75.0%)
# Similarity:   144/192 (75.0%)
# Gaps:          15/192 ( 7.8%)
# Score: 552.0
# 
#
#=======================================

BSNT_02073         1 ATGGAAACAAAAAAAGAAGAATATGAAACAAAAGGCTACGA---TACATC     47
                     ||||||||         ||||||||||||||||||||||||   .|||  
BL05291            1 ATGGAAAC---------AGAATATGAAACAAAAGGCTACGACCTGACA--     39

BSNT_02073        48 GATTGTTTACGAATTCAATGAATATCCGGACGCCCGCAGCGGGCGCTGCG     97
                      |..|||||.||.|.||||.||||||||||.|.||||..|||.||.||||
BL05291           40 -AAAGTTTATGATTACAATCAATATCCGGATGTCCGCCACGGACGGTGCG     88

BSNT_02073        98 ACAACTGTGATTACACACTGTTCAAAAGCTCTGTAAAAGGCGGAAAATTT    147
                     ||||.||.||||||||.||.||.|||||||||||.|||..|||..|.|||
BL05291           89 ACAATTGCGATTACACCCTTTTTAAAAGCTCTGTGAAAAACGGGCAGTTT    138

BSNT_02073       148 CTTAGAGAATGCCGGAGATGCGGGATGAAAAAAAATATTTAA    189
                     .|..|.|||||||||.|.||||||||||||||||..||||.|
BL05291          139 TTGCGCGAATGCCGGCGCTGCGGGATGAAAAAAAGCATTTGA    180


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