Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02925 and BL05282
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence dna-align/BSNT_02925.1.5803.seq
# -bsequence dna-align/BL05282.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02925-BL05282.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02925-BL05282.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02925
# 2: BL05282
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 432
# Identity: 233/432 (53.9%)
# Similarity: 233/432 (53.9%)
# Gaps: 123/432 (28.5%)
# Score: 486.0
#
#
#=======================================
BSNT_02925 1 TTGTATAGAAAC-ATCGTATTTTATCTCATTTT----ACTTTGTCTATTT 45
|||..|| |||| ||||.||||||| ..||||| | |.|||.|.|||
BL05282 1 TTGCTTA-AAACAATCGGATTTTAT-GGATTTTTGGCA-TCTGTATGTTT 47
BSNT_02925 46 ATATC-AGTTGTCATGAAAAGCTTTGAGGT---GATAA---GCACAATAG 88
|.||| ..||.|| ||.||||.|.| ||||| |||| ||
BL05282 48 AAATCTTTTTCTC------AGGTTTGGGCTCAAGATAAACGGCAC---AG 88
BSNT_02925 89 CCAATGTTAT------------CTGCTTTGTTTTCGTATTGCTGTA---- 122
|.||||.||| ||.|.|.||.|||||..||.||||
BL05282 89 CGAATGATATCATCTCAACGGCCTCCCTCGTATTCGTGCTGGTGTACGTA 138
BSNT_02925 123 ---------TTTTAAAGATGAAATGAAAACATACTCA-CGTAAAGCGTTA 162
||..|||.|.|||.||.|||.|..|||| |.||.||
BL05282 139 TGGGACGACTTGAAAAAACGAAGTGCAAAAACGCTCATCTTACAG----- 183
BSNT_02925 163 GCAATC---CTAA--GTATTTGTTTTCTTTTCTTAGTCGGTATCTGTGCT 207
|.|||| ||.| .|.||||| |.||.|||..|||
BL05282 184 GGAATCACTCTCATCATCTTTGT------------GGCGTTATTGGTG-- 219
BSNT_02925 208 TTTATCATTTTACAAGGACAGACATTGA-TGAAACGTCACCT--CTTTTT 254
|||.||||..|..|||||||.|||||.| || |.|| .|| ||||||
BL05282 220 TTTGTCATCATGAAAGGACAAACATTCATTG---CTTC-TCTGCCTTTTT 265
BSNT_02925 255 TACA-GGCAGGGAAACGATAGCGGGCA----------TTCTTTTAATAAT 293
|..| ||..||||||| ||.|||| .|.||| |..|
BL05282 266 TCGAGGGTTGGGAAAC----GCCGGCAAAATGGGTGTATATTT---TGCT 308
BSNT_02925 294 CGTTTCTTT----------AAGCATTTGTACTTTTATTT---TGAGGAGA 330
|||||..|| ||.|.||| |.|.|||.| ||| .|.|
BL05282 309 CGTTTTGTTCTTGGGATCAAACCTTTT---CATCTATATCAATGA-AAAA 354
BSNT_02925 331 ATTTCAAA-TCGGTTAAAACG----ATTGTGA 357
||..|||| || |.||||.| ||..|||
BL05282 355 ATAACAAACTC--TAAAAAAGAGGCATCCTGA 384
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