Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00351 and BL05281
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence dna-align/BSNT_00351___adaA.1.5803.seq
# -bsequence dna-align/BL05281___adaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00351___adaA-BL05281___adaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00351___adaA-BL05281___adaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00351___adaA
# 2: BL05281___adaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 705
# Identity: 356/705 (50.5%)
# Similarity: 356/705 (50.5%)
# Gaps: 213/705 (30.2%)
# Score: 892.0
#
#
#=======================================
BSNT_00351___ 1 ATGCCGGATAGTATCAATAACGGACATAAAGAGAGCCATGAGCATAGAAT 50
||||.||...|||
BL05281___ada 1 -------------------------------------ATGAACAGCAAAT 13
BSNT_00351___ 51 TTCGAATGATGCAGAAATGATAACAGATGAAAAGTGGCAAGCCATTATAA 100
..|||.|||.|| .|||||.|||||..||.||||...
BL05281___ada 14 CACGATTGACGC--------------CTGAAATGTGGCGGGCGATTACGG 49
BSNT_00351___ 101 ATAATGATGCAGCGTACAATAATC--AATTTTT--CTACGCTGTAAAATC 146
|.||.|||.|.||.||..| | |.||||| .|||||.||.|||.|
BL05281___ada 50 AAAACGATTCCGCCTATGA----CGGAGTTTTTTATTACGCGGTCAAAAC 95
BSNT_00351___ 147 GACAGGGATATTCTGTAAACCATCCTGTAAATCTCGCGTTCCGAAAAAAG 196
|||.||.|||||.||....||.|||||.|||||..|.||||||.|||..|
BL05281___ada 96 GACCGGCATATTTTGCCGCCCTTCCTGCAAATCGAGAGTTCCGCAAATCG 145
BSNT_00351___ 197 AAAATGT--ATGTATTTTTCCAAACGCAGAACAAGCTCTCCGCGCAAAT- 243
|.||||| |..|.|||||| ||.|||.||.|.|||.| ||
BL05281___ada 146 ACAATGTGCAGATCTTTTTC--AATGCAAAAGATGCTTT--------ATC 185
BSNT_00351___ 244 -------TTTCGCCCTTGTAAACGTTGCAAGC-----------CTACT-- 273
|..|||||.||.|||||.|||||.| ||.||
BL05281___ada 186 AGAAGGGTACCGCCCCTGCAAACGCTGCAATCCGGCCGGGGCGCTGCTGC 235
BSNT_00351___ 274 --AATGAAAAAATGCCTGATAGCGAGTGGGTTGATCTAATTACTGAATAC 321
.|||||.|..||.| |.||||.|||| || |||..|
BL05281___ada 236 CGGATGAAGAGCTGGC--ACAGCGTGTGG--TG-----------GAAATC 270
BSNT_00351___ 322 ATTGATAAAAATTTCACAGAAAAATTAACG-------------CTAGAAT 358
||.| ||.||..|||.|| ||..||.
BL05281___ada 271 ATCG-------------AGGAATCTTATCGCGATCCGCTGTCTCTGCAAG 307
BSNT_00351___ 359 CGTTAGCAGATATTTGTCATGGGAGTCCGTATCATATGCATCGAACATTT 408
|.||.||.||.|..||.|||...||.||.|.|||..||||.||.||||||
BL05281___ada 308 CTTTGGCTGACAGGTGCCATATCAGCCCTTTTCACCTGCAGCGGACATTT 357
BSNT_00351___ 409 AAAAAGATTAAAGGCATTACCCTGGTTGAGTATAT-----ACAACAAGTT 453
|||...||.||||||.|..|.|.||..||.||.|| |.||.|.|.|
BL05281___ada 358 AAACGAATCAAAGGCGTCTCGCCGGCAGAATACATCCTGCAGAAAAGGAT 407
BSNT_00351___ 454 AGAGTACACGCGGCTAAAAAG-----TATTTG-------ATTCAGACAAA 491
.||| |||| .||||| ||||||
BL05281___ada 408 TGAG-------------AAAGCGGTCGATTTGCTTGCTCATTCAG----- 439
BSNT_00351___ 492 TAA--ATCGATTGGAGATATCGCTAT--ATGTGTGGGTATAGCTAACGCG 537
|| ||||||.|.|||.|||||| | ||| ||.||.||.||.||.|||
BL05281___ada 440 -AACGATCGATCGCAGAAATCGCT-TCAATG-GTAGGCATTGCGAATGCG 486
BSNT_00351___ 538 CCTTATTTTATTACTTTATTTAAAAAGAAAACTGGACA------GACACC 581
...||||||....||||.|||||||||||.|||||.|| |||..|
BL05281___ada 487 GAATATTTTGCCTCTTTGTTTAAAAAGAAGACTGGGCAATCGCCGACGTC 536
BSNT_00351___ 582 AGCACAATTTCGTCAAATGAGTAAAATGGAGGAAACGTACAATGGAAACA 631
|.|| ||.|||||| |||.|||||.||
BL05281___ada 537 -GTAC-----CGGCAAATG----AAACGGAGGTAA--------------- 561
BSNT_00351___ 632 AATAA 636
BL05281___ada 561 ----- 561
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