Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03784 and BL05271
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence dna-align/BSNT_03784___yqeY.1.5803.seq
# -bsequence dna-align/BL05271.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03784___yqeY-BL05271.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03784___yqeY-BL05271.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03784___yqeY
# 2: BL05271
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity: 378/449 (84.2%)
# Similarity: 378/449 (84.2%)
# Gaps: 4/449 ( 0.9%)
# Score: 1591.5
#
#
#=======================================
BSNT_03784___ 1 ATGAGTCTTCTTGAGCGTCTCAACCAGGATATGAAGCTGTATATGAAAAA 50
|||||||||||||||||.||.||.||.|||||||||||.|||||||||||
BL05271 1 ATGAGTCTTCTTGAGCGGCTGAATCAAGATATGAAGCTCTATATGAAAAA 50
BSNT_03784___ 51 CCGTGAGAAAGACAAACTGACTGTCGTTCGAATGGTTAAGGCTTCACTTC 100
|||||||||||||||||||||||||.||||.|||||.||.|||||.||||
BL05271 51 CCGTGAGAAAGACAAACTGACTGTCATTCGCATGGTCAAAGCTTCGCTTC 100
BSNT_03784___ 101 AAAATGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGAGGATGAGGAA 150
||||.||||||||.|||||||||||||||||..|||||||.|||||.|||
BL05271 101 AAAACGAAGCAATCAAGCTTAAGAAAGACAGGCTGACCGATGATGAAGAA 150
BSNT_03784___ 151 CTCACTGTCCTTTCTCGTGAACTTAAGCAACGTAAAGACTCCCTCCAGGA 200
||.|||||.||||||||||||.|.||.||.|||||||||||||||||.||
BL05271 151 CTGACTGTTCTTTCTCGTGAATTAAAACAGCGTAAAGACTCCCTCCATGA 200
BSNT_03784___ 201 ATTTTCAAACGCTAATCGTTTAGATTTAGTAGATAAAGTTCAAAAAGAGC 250
||||||||||||||||||||.||||||||||||||||||||||||||||.
BL05271 201 ATTTTCAAACGCTAATCGTTCAGATTTAGTAGATAAAGTTCAAAAAGAGT 250
BSNT_03784___ 251 TGGACATTTTAGAAGTTTATTTACCTGAGCAGCTGTCAGAAGAAGAGCTG 300
|.||||||.|.||||.||||.|.|||||.||||||.|.||||||||||||
BL05271 251 TAGACATTCTGGAAGCTTATATGCCTGAACAGCTGACGGAAGAAGAGCTG 300
BSNT_03784___ 301 CGT--ACAATCGTAAATGATACCATCGCGGAGGTCGGTGCGAGCTCAAAA 348
| | || |||||.||.||.||.|||||.||.|||||.||....||||||
BL05271 301 C-TCGAC-ATCGTCAACGAGACGATCGCCGAAGTCGGGGCTTCTTCAAAA 348
BSNT_03784___ 349 GCGGACATGGGCAAAGTGATGGGGGCAATTATGCCTAAAGTAAAAGGTAA 398
|||||.|||||||||||||||.|.||..|.|||||.|||||.|||||.||
BL05271 349 GCGGATATGGGCAAAGTGATGAGCGCTGTCATGCCGAAAGTCAAAGGCAA 398
BSNT_03784___ 399 AGCTGACGGAAGTTTAATTAATAAACTTGTGAGCAGTCAACTGTCTTAA 447
.||.|||||..||.|..|.|||||.|||||.||||..||||||||||.|
BL05271 399 GGCGGACGGCGGTCTCGTCAATAAGCTTGTCAGCAAACAACTGTCTTGA 447
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