Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03716 and BL05268

See Amino acid alignment / Visit BSNT_03716 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence dna-align/BSNT_03716___yqgO.1.5803.seq
#    -bsequence dna-align/BL05268___yqgO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03716___yqgO-BL05268___yqgO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03716___yqgO-BL05268___yqgO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03716___yqgO
# 2: BL05268___yqgO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity:     121/186 (65.1%)
# Similarity:   121/186 (65.1%)
# Gaps:          24/186 (12.9%)
# Score: 362.5
# 
#
#=======================================

BSNT_03716___      1 ATGAAAAAACTT-------TTGATA-TATGC--CATTTTCGCGGTTTCTG     40
                     ||||.||||.||       ||| || ||.||  ||         ||.|.|
BL05268___yqg      1 ATGAGAAAAGTTACGTTTATTG-TAGTAGGCGTCA---------TTGCAG     40

BSNT_03716___     41 CCGTCATGTTTTATCAAAATCGCTACCGTCTTATGAATACTGTACTCAGC     90
                     ||.|..|.||||.||||||.||.||.|||.||||.|||....|.||..|.
BL05268___yqg     41 CCCTTGTATTTTTTCAAAACCGTTATCGTGTTATCAATTTCATTCTTGGT     90

BSNT_03716___     91 C--AGCCAGGAATCAGGCGGTCTTTTATCCATTTGTTTTTAAGAATTCCA    138
                     |  |.|||  ||||.|.|..|.|||.|||||||||.|..|.||||||||.
BL05268___yqg     91 CAAAACCA--AATCCGCCACTATTTCATCCATTTGATGATGAGAATTCCG    138

BSNT_03716___    139 TTTATCCGCAATAAGTTTATACAGCAAGCTTTCTAA    174
                     |||.|.||||||||||||||.|||||.||.||||.|
BL05268___yqg    139 TTTTTTCGCAATAAGTTTATCCAGCAGGCATTCTGA    174


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