Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03716 and BL05268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03716___yqgO.1.5803.seq
# -bsequence dna-align/BL05268___yqgO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03716___yqgO-BL05268___yqgO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03716___yqgO-BL05268___yqgO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03716___yqgO
# 2: BL05268___yqgO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 121/186 (65.1%)
# Similarity: 121/186 (65.1%)
# Gaps: 24/186 (12.9%)
# Score: 362.5
#
#
#=======================================
BSNT_03716___ 1 ATGAAAAAACTT-------TTGATA-TATGC--CATTTTCGCGGTTTCTG 40
||||.||||.|| ||| || ||.|| || ||.|.|
BL05268___yqg 1 ATGAGAAAAGTTACGTTTATTG-TAGTAGGCGTCA---------TTGCAG 40
BSNT_03716___ 41 CCGTCATGTTTTATCAAAATCGCTACCGTCTTATGAATACTGTACTCAGC 90
||.|..|.||||.||||||.||.||.|||.||||.|||....|.||..|.
BL05268___yqg 41 CCCTTGTATTTTTTCAAAACCGTTATCGTGTTATCAATTTCATTCTTGGT 90
BSNT_03716___ 91 C--AGCCAGGAATCAGGCGGTCTTTTATCCATTTGTTTTTAAGAATTCCA 138
| |.||| ||||.|.|..|.|||.|||||||||.|..|.||||||||.
BL05268___yqg 91 CAAAACCA--AATCCGCCACTATTTCATCCATTTGATGATGAGAATTCCG 138
BSNT_03716___ 139 TTTATCCGCAATAAGTTTATACAGCAAGCTTTCTAA 174
|||.|.||||||||||||||.|||||.||.||||.|
BL05268___yqg 139 TTTTTTCGCAATAAGTTTATCCAGCAGGCATTCTGA 174
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