Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03711 and BL05266
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03711___yqgQ.1.5803.seq
# -bsequence dna-align/BL05266___yqgQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03711___yqgQ-BL05266___yqgQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03711___yqgQ-BL05266___yqgQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03711___yqgQ
# 2: BL05266___yqgQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 144/240 (60.0%)
# Similarity: 144/240 (60.0%)
# Gaps: 66/240 (27.5%)
# Score: 396.0
#
#
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BSNT_03711___ 1 ATGAATACATTTTATGATGTGCAGC---AGCTGTTAAAAAC-GTTTGGCC 46
|||||.|||...||||||||.|||| .|||| ||.| ||||||
BL05266___yqg 1 ATGAAAACAGCCTATGATGTACAGCTTTTGCTG----AAGCAGTTTGG-- 44
BSNT_03711___ 47 ACAT----TGTTTATTTTGGAGACAGAGAGCTTGAAATTGAGTTTATGCT 92
|| ||||||.||||||||..|.|||||||||.||||.|..|||.|
BL05266___yqg 45 --ATGTTATGTTTACTTTGGAGATCGCGAGCTTGAACTTGAATACATGAT 92
BSNT_03711___ 93 GGATGAATTAAAGGAATTATACATG--------AACCACATGATTGAAAA 134
|||.|||.|.|||||| ||| || |..||||.|||||
BL05266___yqg 93 GGACGAACTGAAGGAA------ATGTTTCTTTCAA--ATTTGATAGAAAA 134
BSNT_03711___ 135 GGAGCAGTGGG-CCAGAGCGGCAGCTGTCCTTCGAAA------AGAATTG 177
.||.||.|||| .|| ||.||| ||| || |||||
BL05266___yqg 135 AGAACAATGGGTTCA-------AGGTGT--TTC--AATTTTGCAGAAT-- 171
BSNT_03711___ 178 GAACAAACAAA-AAACGGAAGAGATTTCTATAAAGGCTAA 216
||||..||||| |.| |||||| ||| |||
BL05266___yqg 172 GAACTCACAAATATA---AAGAGA-------AAA---TAA 198
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