Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03600 and BL05263
See
Amino acid alignment /
Visit
BSNT_03600 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_03600___yqiK.1.5803.seq
# -bsequence dna-align/BL05263.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03600___yqiK-BL05263.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03600___yqiK-BL05263.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03600___yqiK
# 2: BL05263
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity: 485/814 (59.6%)
# Similarity: 485/814 (59.6%)
# Gaps: 170/814 (20.9%)
# Score: 1406.0
#
#
#=======================================
BSNT_03600___ 1 ATGACAAAGATTTTTGCCCACCGGGGGGCATCAGGTCA-ATTTCCCGAAA 49
|||||.||.||.|||||.|||.|.|||||.||||| || .||||||||||
BL05263 1 ATGACGAAAATATTTGCACACAGAGGGGCTTCAGG-CACTTTTCCCGAAA 49
BSNT_03600___ 50 ATACAATGCTTGCATTTGAAAAAGGA----------ATTGAAGCCGGAGC 89
||||||||...||.||| |||.| ||| ||.||
BL05263 50 ATACAATGGCGGCGTTT----AAGCATGCGGCGGCCATT------GGTGC 89
BSNT_03600___ 90 GGATGGGATAGAGCTTGATGTACAGCTGACGAAAGACGGACGCATTGTTG 139
.||.||.||.||..|.|||||.||..||.|.|||||||||||..||||||
BL05263 90 CGACGGCATCGAATTGGATGTTCAAATGGCAAAAGACGGACGTCTTGTTG 139
BSNT_03600___ 140 TGATTCATGATGAAAGACTTAATCGCACGACATCACTTAAAGGATTCGTG 189
|.|||||||||||||..|||.|..|.|||||.|||||.|||||.|..|||
BL05263 140 TCATTCATGATGAAAAGCTTGACAGGACGACTTCACTGAAAGGGTATGTG 189
BSNT_03600___ 190 AAGGATACAACCTATGATGAGGTAAAGACTGCGAATGCGGCCGCTGGTCA 239
||.|||...||.|||||.||..|||| || .|||..|
BL05263 190 AAAGATCTTACATATGAGGAAATAAA-AC--------------ATGGAGA 224
BSNT_03600___ 240 CGATCAAGCGTACAGCGAT------ATAAAA--------------GTGCC 269
|| ||||| ||.||.| |.|||| |||||
BL05263 225 CG--CAAGC---CACCGTTTTGCCGAAAAAACCGGTTCTGTCCCTGTGCC 269
BSNT_03600___ 270 GCTGCTAGAAGATGTGCTCTCGTGGGCGGTAAAAAAGGATTTTCTCATCA 319
|...||.|||||.|||.|...||||||||.|.|....||.|||||..|.|
BL05263 270 GACCCTTGAAGAAGTGTTTGAGTGGGCGGCAGATGCTGAATTTCTTCTTA 319
BSNT_03600___ 320 ACATTGAATTAAAAAACAGCGTGATCCGCTATGAGGGAATGGAAGAAAAA 369
|..|||||||.|||||||||.|.|||||||||||.||.||||||||||||
BL05263 320 ATGTTGAATTGAAAAACAGCATTATCCGCTATGAAGGGATGGAAGAAAAA 369
BSNT_03600___ 370 GTGCTG--GAGGCAGTGAAGCG------ATTCAATGTAGAGGACAGAGTC 411
|||.|| ||.| |.||||||| .||||| |||.|..||
BL05263 370 GTGATGTCGATG-ATTGAAGCGTACGACCTTCAA-------GACCGGATC 411
BSNT_03600___ 412 ATCCTATCCACCTTTAATCATGACAGCTTGGCGCTATGCGCCCGGCTTGC 461
||.||.||..|.||.||||||||.|||.|.|||.|||||..|.|.||
BL05263 412 ATTCTTTCATCATTCAATCATGAAAGCCTTGCGTTATGCCACAGACT--- 458
BSNT_03600___ 462 GCCGCATATCGAACGGGCAGTATTAACTTCAGATGTGCTTT--------- 502
..|||.| ||||||.|.|| .|.||.|||||
BL05263 459 -----GAATCCA------AGTATTGAATT-GGCTGCGCTTTACATGGATG 496
BSNT_03600___ 503 --ATC----AGGCAGATCGATATATCGCGTCTATTCCGGCTTCCGGCTAT 546
||| ||.|.||...|||.||.|.|...|||||||||||.||.|.|
BL05263 497 TCATCTACAAGCCGGAGGAATACATTGAGATGATTCCGGCTTCAGGATTT 546
BSNT_03600___ 547 CACCCGAAGCTAAACAGCCCAGGGGTCA----CAGATGAAGTACTGAAGA 592
||.|||.|.| ||| |.||| |.||||| .|| ||..|
BL05263 547 CATCCGTATC------GCC----GTTCAATGTCGGATGA--CAC-GATCA 583
BSNT_03600___ 593 AAATGAGGAACG---GTTTGATTAA--------GGTAAGGCCGTATACAG 631
|| |||| .||||| || |||.|||||||..||..
BL05263 584 AA------AACGCCCATTTGA--AAGAAAAAGCGGTCAGGCCGTTCACCA 625
BSNT_03600___ 632 TCAATCGTCCGGAAGATATGAAGCGTCTCATTGAAGCGGGAGCAGACGGC 681
||||.|||...||.||.|||||....||.||||..||||||..||||||.
BL05263 626 TCAACCGTGAAGAGGAGATGAAAAAGCTGATTGCTGCGGGAATAGACGGT 675
BSNT_03600___ 682 ATGTTTACCGACTTTCCAGAAAAGGC-TTCGGCATTGCTGAAAAATGAAT 730
.|.||.|||||||||||.|||||.|| || |||||.||
BL05263 676 TTCTTCACCGACTTTCCCGAAAAAGCGTT------------AAAATTAA- 712
BSNT_03600___ 731 AG------------ 732
||
BL05263 713 AGGCCGAGATGTGA 726
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.