Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03474 and BL05245
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence dna-align/BSNT_03474___ppiB.1.5803.seq
# -bsequence dna-align/BL05245___ppiB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03474___ppiB-BL05245___ppiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03474___ppiB-BL05245___ppiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03474___ppiB
# 2: BL05245___ppiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 313/459 (68.2%)
# Similarity: 313/459 (68.2%)
# Gaps: 48/459 (10.5%)
# Score: 1035.0
#
#
#=======================================
BSNT_03474___ 1 ATG---AAAACAGGTTACATTTTAATGGAAAATGGCAACAAACTTGAATT 47
||| ||||.|||.|||||...|.||..|||.|||||.|||.|.||.||
BL05245___ppi 1 ATGGCTAAAAAAGGATACATACAACTGACAAACGGCAAAAAAATCGAGTT 50
BSNT_03474___ 48 TGAACTTTA--CGATGAAGCAGCTCCGGGTACAGTAGCTAACTTTGAAAA 95
||||||.|| || ||.||.||.|||||.||.||.||.|||||||||||
BL05245___ppi 51 TGAACTATATCCG--GATGCGGCGCCGGGAACTGTCGCCAACTTTGAAAA 98
BSNT_03474___ 96 GCTTGCGAATGAAGGCTTTTATGATGGTGTAACTTTCCACCGAGTAATTC 145
.|||||.||.|||||.||.|||||.||..|.|..||||||||.||.||.|
BL05245___ppi 99 ACTTGCAAACGAAGGGTTCTATGACGGGCTGAAGTTCCACCGCGTCATCC 148
BSNT_03474___ 146 CAGGTTTCGTAAGCCAAGGGGGAGATCCT-----------ACTGGAACAG 184
|.||.|||||.|||||.||.|| || ||.||||||
BL05245___ppi 149 CGGGCTTCGTCAGCCAGGGAGG-----CTGCCCGCACGGCACCGGAACA- 192
BSNT_03474___ 185 GGATGGGTGGCCCAGGTTACACAATCAAATGTGAAACAGAAGGAAATCCG 234
||.||.||.||.||.||.||.|||||.||.||||||||.||||||
BL05245___ppi 193 -----GGCGGACCTGGATATACGATTAAATGCGAGACAGAAGGGAATCCG 237
BSNT_03474___ 235 CATACACATGAAGCGGGCTCTCTTTCTATGGCACATGCCGGAAAAGACAC 284
||.|.|||.|||||.||.|||||.||.|||||.||.||.||||||||.||
BL05245___ppi 238 CACAAACACGAAGCCGGTTCTCTCTCAATGGCTCACGCAGGAAAAGATAC 287
BSNT_03474___ 285 TGGCGGCAGCCAATTTTTCATCGTTCATGAGCCACAGCCTCATTTGAACG 334
.||.|||||||||||.||.|||||.||||||||.|||||.||.|||||||
BL05245___ppi 288 CGGAGGCAGCCAATTCTTTATCGTCCATGAGCCTCAGCCGCACTTGAACG 337
BSNT_03474___ 335 GTGTTCACACTGTATTCGGTAAAGTAACAAGCGGATTAGAATTCGCGAAA 384
|.||||||||.||.|||||.||.||.|||...||..|.||...||
BL05245___ppi 338 GCGTTCACACCGTTTTCGGAAAGGTCACATCAGGCCTTGATGCCG----- 382
BSNT_03474___ 385 AACATGTCTAACGGCG-------ATGTCATGAAAGAAGTTCG-CGTA--- 423
.||..|| ||.||.| |.|.||||.||.||| ||| .|||
BL05245___ppi 383 -TCACTTC-AATGGAGCAGGGACAAGGCATGGAAAAAG-TCGAAGTATTT 429
BSNT_03474___ 424 GAAGGCTAA 432
||.|..|||
BL05245___ppi 430 GATGCATAA 438
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