Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06156 and BL05243
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_06156.1.5803.seq
# -bsequence dna-align/BL05243.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06156-BL05243.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06156-BL05243.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06156
# 2: BL05243
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 462
# Identity: 309/462 (66.9%)
# Similarity: 309/462 (66.9%)
# Gaps: 45/462 ( 9.7%)
# Score: 948.0
#
#
#=======================================
BSNT_06156 1 ATGTCATTAACACCGTATGATCCATTTAGACAACTAGCAAAT---ATGAG 47
|||.|.|||..|||.||.||.|||||||.|||..| .||| ||.||
BL05243 1 ATGCCGTTAGTACCTTACGAACCATTTAAACATTT---GAATACGATCAG 47
BSNT_06156 48 AAGAAATTTTGACCGTTTTTTCTCTGACTTCCCTCTAGATCTTGGGATGG 97
||||.|.|||||.||..|.||..|.||.||.||...| |.|||.||| ||
BL05243 48 AAGAGAGTTTGATCGGGTGTTTGCCGATTTTCCGGCA-AACTTTGGA-GG 95
BSNT_06156 98 AAAACAATAAT----TTTGGTAATATCAGAGTTGATGTGCATGAAACTGA 143
|.|.|| |||||..|||||||.|||||||||||||||.|.|.
BL05243 96 AGAGCA-----CGGCTTTGGCGATATCAGGGTTGATGTGCATGAAGCCGG 140
BSNT_06156 144 AAATGAAGTAATTGCTTCATGTGATATTCCAGGTCTTGAGAAAAAGGAAG 193
.||||||.|..|.||.||.||.|||||.||.||.|||||.|..||.||||
BL05243 141 GAATGAAATCGTCGCCTCCTGCGATATCCCGGGCCTTGAAAGCAAAGAAG 190
BSNT_06156 194 ATGTAAATATTGATATTGAAAATAATATG-TTAAGCATCAACGGTACCAT 242
||||..|||||||..|||||||.|||||| ||.| .||||.|||.|||||
BL05243 191 ATGTTCATATTGAGGTTGAAAACAATATGCTTCA-TATCAGCGGAACCAT 239
BSNT_06156 243 CAATAAAACAAATGAGATTAAAGAAGAAAGTATGTATAGAAAAGAACGCT 292
|||.|...|||..||..|.|||||.||||..|||.|..|.||||||||.|
BL05243 240 CAACAGGTCAAGCGAAGTAAAAGAGGAAAACATGCACCGGAAAGAACGAT 289
BSNT_06156 293 ATACAGGTAGCTTTCATAGGACTGT-----ATCCT--TGCC--AAGCCCT 333
.||||||..|.|||||.|||.|.|| .|||| |.|| .||||
BL05243 290 TTACAGGCCGTTTTCACAGGGCAGTCGCGCTTCCTGCTCCCGTCAGCC-- 337
BSNT_06156 334 GTATCTAATGAGGGAGTAAAAGCAACCTATAAGAACGGTGTTCTTGAAGT 383
.|||.|||.|||.|||..|.||||.||||||.||.||||||||
BL05243 338 -------GTGAAGGAATAAGAGCTTCTTATAGGAACGGCGTGCTTGAAGT 380
BSNT_06156 384 CAGAATGCC-AAAGAAAA---CAAATGATAACAAAAAGAAAATTGATGTA 429
.|||||||| |||||.|| | ||..|.|||||||..||.|||||.
BL05243 381 GAGAATGCCGAAAGACAAGCCC----GACGAAAAAAAGAGGATAGATGTG 426
BSNT_06156 430 GACTTTCACTAA 441
||.|||||.|||
BL05243 427 GAATTTCATTAA 438
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