Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03449 and BL05242

See Amino acid alignment / Visit BSNT_03449 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence dna-align/BSNT_03449___spmB.1.5803.seq
#    -bsequence dna-align/BL05242___spmB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03449___spmB-BL05242___spmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03449___spmB-BL05242___spmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03449___spmB
# 2: BL05242___spmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity:     422/537 (78.6%)
# Similarity:   422/537 (78.6%)
# Gaps:           0/537 ( 0.0%)
# Score: 1650.0
# 
#
#=======================================

BSNT_03449___      1 ATGGAAATCATCAACTGGCTGTCTTTAGCCATGATTCCAATCATTATTGC     50
                     .|||||.|||||||||||||.|||.|.|||.|.||.||..|.||.||.||
BL05242___spm      1 TTGGAATTCATCAACTGGCTTTCTCTGGCCCTTATCCCGTTTATCATCGC     50

BSNT_03449___     51 CGGAATTCTTCTTTATGGAACGATCAAAAAGGTTCCGACATATGAATCGT    100
                     |...|||||.||.||.||.||..|||||||.||||||||.||||||.|||
BL05242___spm     51 CACGATTCTGCTATACGGTACATTCAAAAAAGTTCCGACTTATGAAGCGT    100

BSNT_03449___    101 TTGTCGAAGGTGGGAAAGAGGGGATAGAAATTGCCTTTTCCATTATCCCC    150
                     ||||.||.||.|||||.||.||.||..|||||||.||||||||||||||.
BL05242___spm    101 TTGTTGAGGGGGGGAAGGAAGGAATCCAAATTGCATTTTCCATTATCCCT    150

BSNT_03449___    151 TATTTAGTCGGAATGCTTGTCGCTATAACTGTTTTCAGATCATCAGGCGC    200
                     |||||||||||.||||||||.||.||.||.||||||.|..|.|||||.||
BL05242___spm    151 TATTTAGTCGGTATGCTTGTAGCGATCACGGTTTTCCGGGCTTCAGGGGC    200

BSNT_03449___    201 GCTTGATTTTATAATGGATCTTTTAAAACCGGCTTTCTCCGCTATCGGCA    250
                     |||.||||||.|.|||.||||||||||.||.|..||.|||||..|.||.|
BL05242___spm    201 GCTCGATTTTTTTATGAATCTTTTAAAGCCCGTGTTTTCCGCCGTGGGAA    250

BSNT_03449___    251 TTCCTGCTGAAGTAGTGCCGCTTGCTCTGATCCGCCCGATCTCCGGTACG    300
                     ||||..|.|||||.||.|||||.|||||||||||.|||||.||.||.|||
BL05242___spm    251 TTCCGACGGAAGTGGTTCCGCTGGCTCTGATCCGGCCGATTTCGGGAACG    300

BSNT_03449___    301 GCCGCTCTCGGAATGACGACCGATTTAATTGCAGTATACGGGCCCGATTC    350
                     ||.||.|||||.||||||||||||||.||.||.||.||||||||||||||
BL05242___spm    301 GCAGCGCTCGGCATGACGACCGATTTGATCGCCGTTTACGGGCCCGATTC    350

BSNT_03449___    351 CTTTATCGGCAGGCTGGCTTCCGTCATGCAGGGATCTACAGATACAACGC    400
                     .||.||||||.|||||||.||.||||||||||||||.|||||.||.||.|
BL05242___spm    351 GTTCATCGGCCGGCTGGCCTCTGTCATGCAGGGATCGACAGACACGACTC    400

BSNT_03449___    401 TTTACGTACTGACTGTGTATTTCGGAGCAGTCGGCATTAAAAAAATGGGT    450
                     |.|||||..||||.||.|||||||||||.|||||.||.||.||||||||.
BL05242___spm    401 TGTACGTTTTGACCGTCTATTTCGGAGCGGTCGGAATCAAGAAAATGGGG    450

BSNT_03449___    451 GATGCATTAAAGGTGGGACTTCTTGCAGATTTAATCGGCGTAGTTGCATC    500
                     |||||.||||||||||||||.|||||.||||||...||.||..|.||.||
BL05242___spm    451 GATGCTTTAAAGGTGGGACTGCTTGCTGATTTAGCGGGGGTTATCGCGTC    500

BSNT_03449___    501 TATCATCATCGTTACGTTATTATTTGGGAGCGCCTGA    537
                     |.|.||.||.||.||.||..|.|||||.|||||||||
BL05242___spm    501 TGTAATTATTGTAACATTGCTGTTTGGAAGCGCCTGA    537


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