Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03429 and BL05239

See Amino acid alignment / Visit BSNT_03429 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:24
# Commandline: needle
#    -asequence dna-align/BSNT_03429___fer.1.5803.seq
#    -bsequence dna-align/BL05239___fer.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03429___fer-BL05239___fer.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03429___fer-BL05239___fer.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03429___fer
# 2: BL05239___fer
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     202/249 (81.1%)
# Similarity:   202/249 (81.1%)
# Gaps:           0/249 ( 0.0%)
# Score: 822.0
# 
#
#=======================================

BSNT_03429___      1 ATGGCAAAGTACACAATCGTAGACAAAGATACATGTATTGCATGCGGCGC     50
                     |||.||||.||.|||||.||||||||||||||.||.||.||||||||.||
BL05239___fer      1 ATGCCAAAATATACAATTGTAGACAAAGATACGTGCATCGCATGCGGAGC     50

BSNT_03429___     51 TTGCGGAGCTGCTGCACCAGACATTTACGATTACGATGATGAAGGCATCG    100
                     |||.||.|||||.||.||.||.|||||.||||||||.|||||.||.||||
BL05239___fer     51 TTGTGGTGCTGCGGCTCCTGATATTTATGATTACGACGATGAGGGAATCG    100

BSNT_03429___    101 CGTTCGTAACGCTTGATGAAAACAAAGGTGTTGTCGAAGTTCCTGAGGTA    150
                     |.||.||.||.|||||.||.||..|.|||||.||||||||.|||||.||.
BL05239___fer    101 CATTTGTCACCCTTGACGACAATCAGGGTGTCGTCGAAGTCCCTGACGTC    150

BSNT_03429___    151 CTGGAAGAAGATATGATTGACGCATTTGAAGGATGCCCTACTGATTCCAT    200
                     .|.||||||||.|||||.|||||.||||||||.||.|||||.|||||.||
BL05239___fer    151 TTAGAAGAAGACATGATGGACGCGTTTGAAGGCTGTCCTACAGATTCGAT    200

BSNT_03429___    201 CAAAGTGGCGGATGAGCCATTTGAAGGCGACCCGCTTAAATTTGAATAG    249
                     ||||||.|||||||||||.||.||||||||||||||||||...|||||.
BL05239___fer    201 CAAAGTTGCGGATGAGCCGTTCGAAGGCGACCCGCTTAAACACGAATAA    249


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