Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03354 and BL05237

See Amino acid alignment / Visit BSNT_03354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:04
# Commandline: needle
#    -asequence dna-align/BSNT_03354___qcrC.1.5803.seq
#    -bsequence dna-align/BL05237___qcrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03354___qcrC-BL05237___qcrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03354___qcrC-BL05237___qcrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03354___qcrC
# 2: BL05237___qcrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity:     580/771 (75.2%)
# Similarity:   580/771 (75.2%)
# Gaps:           6/771 ( 0.8%)
# Score: 2119.0
# 
#
#=======================================

BSNT_03354___      1 ATGCACCGGGGCAAAGGGATGAAATTTGTAGGCGACTCAAGGATACCGGC     50
                     |||.|..||||.|||||||||||.|||||.||.||.|||.||||.|||||
BL05237___qcr      1 ATGAAAAGGGGAAAAGGGATGAAGTTTGTCGGTGATTCACGGATCCCGGC     50

BSNT_03354___     51 TGAAAAAAAGCCGAATATACCGAAGGATTATTCGGAGTATCCCGGTAAAA    100
                     .||||.|||.||||||||.||.||.||||||||.||.|.|||.||.||||
BL05237___qcr     51 GGAAAGAAAACCGAATATTCCAAAAGATTATTCCGAATTTCCAGGGAAAA    100

BSNT_03354___    101 CAGAGGCTTTCTGGCCAAATTTCTTGTTAAAGGAATGGATGGTTGGAGCT    150
                     |.||.||.||||||||.||||||.||.|.||.|||||||||||.|||||.
BL05237___qcr    101 CGGAAGCGTTCTGGCCGAATTTCCTGCTGAAAGAATGGATGGTCGGAGCG    150

BSNT_03354___    151 GTCTTTCTCATCGGTTTTCTCGTTTTGACGATTGTGCATCAGCCGCCTTT    200
                     ||.||.||..|||||||||||||..||||.||.||||||.||||.||..|
BL05237___qcr    151 GTTTTCCTTGTCGGTTTTCTCGTGCTGACCATCGTGCATGAGCCTCCGCT    200

BSNT_03354___    201 GGAGCGGATGGCGGACCCGACTGATACTGGTTATATTCCGCTGCCGGATT    250
                     .|||||||||||.||.|||||.|||||.||.||.||.||..||||.||.|
BL05237___qcr    201 CGAGCGGATGGCAGATCCGACCGATACCGGCTACATACCTTTGCCAGACT    250

BSNT_03354___    251 GGTATTTTCT-TTTCTTATACCAGCTGTTGAAGTATGAATACGCCGCCGG    299
                     |||||||||| |||||| |||||..||.||||.||.|||||.||.|||||
BL05237___qcr    251 GGTATTTTCTATTTCTT-TACCAATTGCTGAAATACGAATATGCTGCCGG    299

BSNT_03354___    300 AAGCTTTACAGTGGTCGGCGCCATGATTATGCCAGGTC--TCGCTTTTGG    347
                     |...|.|||.||.||||||||.||.|||||.||  |.|  |.||.||.||
BL05237___qcr    300 ACCGTATACGGTTGTCGGCGCGATTATTATCCC--GACAATTGCGTTCGG    347

BSNT_03354___    348 GGCCCTGCTTTTGGCTCCATTCCTAGACAGAGGGACAGAAAGAAGGCCGT    397
                     .||.||..|.|||||.||.||.||.||||||||..|.|||||||||||||
BL05237___qcr    348 AGCGCTTTTATTGGCGCCGTTTCTTGACAGAGGCCCTGAAAGAAGGCCGT    397

BSNT_03354___    398 GGAAGCGTCCGGTCGCTGTCGGTATGATGCTTCTGGCCATTTCCGCTGCT    447
                     ..||.||.|||||.||.||.||..||||||||.||||.|||||.||..|.
BL05237___qcr    398 TTAAACGCCCGGTTGCCGTAGGGTTGATGCTTTTGGCGATTTCAGCGACG    447

BSNT_03354___    448 GTATTTTTGACGTGGCAGTCAGTTGCTACTCATGACTGGGCCAAGGCAGA    497
                     ||.||.||.|||||||||||.||||..|||||.|||||||||...||.||
BL05237___qcr    448 GTTTTCTTAACGTGGCAGTCCGTTGTCACTCACGACTGGGCCGCTGCTGA    497

BSNT_03354___    498 AGAACAGGGGAAAATCACAAAAGAAGCCGACATTGACACCAATGCAGAAG    547
                     |||.|||||.|||||||...||||.|||||.|||||.||.|.|||.||||
BL05237___qcr    498 AGAGCAGGGTAAAATCAAGGAAGAGGCCGATATTGATACGAGTGCGGAAG    547

BSNT_03354___    548 GATATAAGGTCTTTAAGGAACAGGGCTGTATTTCTTGCCATGGGGATAAC    597
                     |.||||||.|.|.|.||||.|||||||||||.||.|||||.||.||.|||
BL05237___qcr    548 GCTATAAGATTTATCAGGAGCAGGGCTGTATCTCGTGCCACGGAGACAAC    597

BSNT_03354___    598 CTTCAGGGAGGAGCGGCCGGGCCTTCATTGGTTGACAGCGGGCTGAAACC    647
                     .|.||.|||||||||||.||.||.||..|.|||||||.|||..||...||
BL05237___qcr    598 ATGCAAGGAGGAGCGGCAGGCCCGTCTCTCGTTGACAACGGCTTGTCTCC    647

BSNT_03354___    648 GGATGAAATCAAAAAAATAGCTGTAGAAGGGAAAGGCAAAATGCCGGCGG    697
                     .||.||.||....|||||.||....|||||.||||||.|||||||.||.|
BL05237___qcr    648 TGAAGAGATTGCGAAAATCGCCAAGGAAGGAAAAGGCGAAATGCCTGCCG    697

BSNT_03354___    698 GTGTGTTCAAAGGAAATGATAAGCAACTCGAAGAACTTGCAAAATTTATT    747
                     |.||.||.||||||..|||.||..|.||..|||||||..|.|||||.||.
BL05237___qcr    698 GCGTTTTTAAAGGATCTGACAAAGAGCTTAAAGAACTGTCTAAATTCATC    747

BSNT_03354___    748 TCTGAAACAACCGCAAAATAA    768
                     ||.||||||||.||.||||||
BL05237___qcr    748 TCCGAAACAACGGCGAAATAA    768


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