Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03302 and BL05235

See Amino acid alignment / Visit BSNT_03302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence dna-align/BSNT_03302___ypsB.1.5803.seq
#    -bsequence dna-align/BL05235___ypsB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03302___ypsB-BL05235___ypsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03302___ypsB-BL05235___ypsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03302___ypsB
# 2: BL05235___ypsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     252/297 (84.8%)
# Similarity:   252/297 (84.8%)
# Gaps:           0/297 ( 0.0%)
# Score: 1080.0
# 
#
#=======================================

BSNT_03302___      1 ATGCTTGCTGATAAAGTAAAGCTTTCTGCGAAAGAAATTTTGGAAAAAGA     50
                     |||||||||||||||||.|||||||||||.||||||||||||||||||||
BL05235___yps      1 ATGCTTGCTGATAAAGTGAAGCTTTCTGCTAAAGAAATTTTGGAAAAAGA     50

BSNT_03302___     51 ATTTAAAACAGGCGTTAGAGGCTACAAGCAAGAAGACGTTGACAAATTTT    100
                     |||.||||||||.||.||||||||||||||.|||||||||||||||||.|
BL05235___yps     51 ATTCAAAACAGGAGTCAGAGGCTACAAGCAGGAAGACGTTGACAAATTCT    100

BSNT_03302___    101 TAGATATGATTATTAAGGATTATGAAACCTTCCATCAAGAAATTGAAGAA    150
                     |.||.|||.||||||||||.||||||.||||||||||.|||||.||||||
BL05235___yps    101 TGGACATGGTTATTAAGGACTATGAAGCCTTCCATCAGGAAATCGAAGAA    150

BSNT_03302___    151 CTGCAGCAGGAAAATCTTCAGCTGAAAAAACAGCTTGAAGAAGCAAGTAA    200
                     .|||||||||||||.||.|||.||||||||||||||||||||||.|..||
BL05235___yps    151 TTGCAGCAGGAAAACCTGCAGTTGAAAAAACAGCTTGAAGAAGCCAACAA    200

BSNT_03302___    201 AAAACAGCCTGTGCAATCTAACACAACAAACTTTGATATTTTAAAACGGC    250
                     ...||||||.|..|||||.||.||.||.||.|||||||||.|||||||.|
BL05235___yps    201 GCGACAGCCGGCTCAATCAAATACGACCAATTTTGATATTCTAAAACGAC    250

BSNT_03302___    251 TGTCTAACTTAGAAAAACACGTTTTTGGCAGCAAGCTTTATGATTGA    297
                     |.||.||.||.||||||||.||.|||||.|||||..|.||.||||||
BL05235___yps    251 TTTCCAATTTGGAAAAACATGTATTTGGAAGCAAATTATACGATTGA    297


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