Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03274 and BL05230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence dna-align/BSNT_03274___ypeP.1.5803.seq
# -bsequence dna-align/BL05230___ypeP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03274___ypeP-BL05230___ypeP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03274___ypeP-BL05230___ypeP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03274___ypeP
# 2: BL05230___ypeP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 731
# Identity: 472/731 (64.6%)
# Similarity: 472/731 (64.6%)
# Gaps: 121/731 (16.6%)
# Score: 1472.0
#
#
#=======================================
BSNT_03274___ 1 ATGAAGCTCAGACCGCA--TTTGAAAATAGAAGCAAAAGGAACAGGATCC 48
.||||.||.||| ||| ..||||||| |||.|..|| |||.| |
BL05230___ype 1 GTGAAACTGAGA--GCAGGAATGAAAAT-----CAAGATTAA-AGGGT-C 41
BSNT_03274___ 49 GTC------TCATTTTTTAG-CGAAGACTGG------CTGACAGCACAGC 85
.|| |||.|||..|| |||.||.||| .|||.||
BL05230___ype 42 TTCACCCATTCAATTTACAGCCGATGAATGGATCGAAGTGAAAG------ 85
BSNT_03274___ 86 AGGCA------------CGT----TTGCTC---GCCAGAGAACTTGGACG 116
||||| ||| ||.||| ||| ||
BL05230___ype 86 AGGCAGTGGCGGCGGGGCGTCAGCTTTCTCAAAGCC------------CG 123
BSNT_03274___ 117 T-TTTCCATACATGAAAGAGCTAGAGTTCGAAGACGAGAAAGGCGGCAGC 165
| |.|| || |||| ||.||.||||||||.|||||.|||.||...
BL05230___ype 124 TATGTC---AC-TGAA----CTTGAATTCGAAGATGAGAAGGGCAGCTTT 165
BSNT_03274___ 166 TGGATGCTGAAGGAATTGGAAAAGCTGACAGAGGAGCTTGCTCAAGAGCC 215
||||..|||||.|||.||||||||||||.|||.||.|||||....||.||
BL05230___ype 166 TGGACCCTGAAAGAACTGGAAAAGCTGAAAGAAGAACTTGCGGCTGAACC 215
BSNT_03274___ 216 TGATGACATTACTGTTTATTTTGACGGCAGTTTCGATAAGGAGAGCGAAC 265
.|||||.||.||.||.||||||||||||||.|..|||||.||.||..|.|
BL05230___ype 216 GGATGAGATCACCGTGTATTTTGACGGCAGCTATGATAAAGAAAGTCAGC 265
BSNT_03274___ 266 TGGCCGGTCTCGGGATCGTCATCTATTATTCATTGGGAGG---AACCCGG 312
|.||||||.|.||.||.||.||.|||||.||..|.||.|| || ||
BL05230___ype 266 TCGCCGGTTTAGGCATTGTGATTTATTACTCCCTCGGCGGGGAAA---GG 312
BSNT_03274___ 313 CATCGCTTGAGAAAAAATAAAAGCTTCCGGCTGAAAACCAATAATGAAGC 362
.||||.||||||||.|||||.|||||.|||||||.|||.|||||.|||||
BL05230___ype 313 TATCGATTGAGAAAGAATAAGAGCTTTCGGCTGACAACGAATAACGAAGC 362
BSNT_03274___ 363 TGAATACGCAGCGCTTTATGAAGCAATAAGAGAAGTAAGAGAGCTTGGGG 412
.|||||.||.||.||.||.|||||..|.|.|||..|.|||||.||.||||
BL05230___ype 363 GGAATATGCGGCTCTCTACGAAGCCGTTAAAGAGCTTAGAGACCTCGGGG 412
BSNT_03274___ 413 CAAGCAGAAATTCAATTACAATCAAAGGGGACTCGCTTGTCGTGCTGAAT 462
|||||||.||.||..|....||.||||||||.|||||.|||||.||||||
BL05230___ype 413 CAAGCAGGAACTCCGTCGTCATTAAAGGGGATTCGCTCGTCGTTCTGAAT 462
BSNT_03274___ 463 CAGCTTGACGGCAGCTGGCCTTGTTATGATCCATCTCATAATGAATGGCT 512
||||||||.|||||||||||.||.||||||||...||||....|||||||
BL05230___ype 463 CAGCTTGAAGGCAGCTGGCCATGCTATGATCCCGTTCATTCGAAATGGCT 512
BSNT_03274___ 513 GGACAAAATAG-AAGCACTCCTTGAATCGCTGAAGCTTACTCCAACCTAC 561
|||||.|||.| |||| |..|||.||....|.|||||.||.||.|||||
BL05230___ype 513 GGACAGAATCGAAAGC-CAGCTTCAAAAATTAAAGCTCACGCCCACCTA- 560
BSNT_03274___ 562 GAAACAATACAA------CGAAAAGACAATCAGGAAGCTGACGGCCTCGC 605
.||.||| ||.|||||||||.|||||||.|||...|||||
BL05230___ype 561 -----TATTCAAATCAGCCGTAAAGACAATAAGGAAGCGGACCAGCTCGC 605
BSNT_03274___ 606 TAAAAAAATTCT-----ATCCCATCAATTCGTAGAAAGCCACACGAAATT 650
.||||||||.|| ||.||| |.||.||||| ||| |||.
BL05230___ype 606 AAAAAAAATGCTTGAGCATACCA-----TTGTGGAAAG---CAC--AATC 645
BSNT_03274___ 651 AGACCGTAACGGAGATGACGATATTGGATAA 681
|.|| .|||||| ||||
BL05230___ype 646 AAAC-------TAGATGA---------ATAA 660
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